RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CDSNQ15517 529 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 RPE65Q16518 533 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 CA9Q16790 459 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 DPCR1Q3MIW9 517 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 ZNF385BQ569K4 471 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 ANKRD20A8PQ5CZ79 823 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 CCDC183Q5T5S1 534 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 ERMARDQ5T6L9 678 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 MARC1Q5VT66 337 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 KLHDC7AQ5VTJ3 777 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 PLEKHA7Q6IQ23 1121 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 FBXO38Q6PIJ6 1188 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 OOSP2Q86WS3 158 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 ELOA2Q8IYF1 753 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-236ENST00000556220 C3orf20Q8ND61 904 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 CHDHQ8NE62 594 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-236ENST00000556220 OR1N1Q8NGS0 311 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 GPR150Q8NGU9 434 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 OR2Y1Q8NGV0 311 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 CCHCR1Q8TD31 782 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 ADAMTS18Q8TE60 1221 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 SLC20A1Q8WUM9 679 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 NSMCE1Q8WV22 266 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 TEKT4Q8WW24 435 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 MAP6Q96JE9 813 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 MAGEB10Q96LZ2 347 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-236ENST00000556220 PPM1MQ96MI6 270 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 TAAR6Q96RI8 345 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 LMF1Q96S06 567 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 CNPY3Q9BT09 278 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 NAA15Q9BXJ9 866 aaKnown RBP6.62□□□□□ -1.35
ATXN3-236ENST00000556220 STK33Q9BYT3 514 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 VPS16Q9H269 839 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 CXXC4Q9H2H0 198 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 DHX35Q9H5Z1 703 aaKnown RBP6.62□□□□□ -1.35
ATXN3-236ENST00000556220 EPS8L2Q9H6S3 715 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 PKD2L2Q9NZM6 624 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 CHKBQ9Y259 395 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 PCDHB14Q9Y5E9 798 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 FHOD1Q9Y613 1164 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 CACNA1CQ13936 2221 aa6.62□□□□□ -1.35
ATXN3-236ENST00000556220 DOCK10Q96BY6 2186 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 ANKRD12Q6UB98 2062 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 ATRQ13535 2644 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 C1orf232A0A0U1RR37 186 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 TCRBV5S1A1TA0A578 114 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CCDC66A2RUB6 948 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 OR6C74A6NCV1 312 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 MTX2O75431 263 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CDK14O94921 469 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 UNC5CO95185 931 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 MBD3O95983 291 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CALB1P05937 261 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 UMODP07911 640 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CBSLP0DN79 551 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 UNGP13051 313 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 VCLP18206 1134 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 DNAJA1P31689 397 aaKnown RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CBSP35520 551 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CCNFP41002 786 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 HALP42357 657 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 HCAR3P49019 387 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CASP6P55212 293 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 RPL7AP62424 266 aaKnown RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 PPP2R2AP63151 447 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 DCDP81605 110 aaKnown RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CDR2Q01850 454 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 IHHQ14623 411 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 SLC14A2Q15849 920 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 ZNF569Q5MCW4 686 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 IRAK1BP1Q5VVH5 260 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 ARMC6Q6NXE6 501 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 ISLR2Q6UXK2 745 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 C11orf96Q7Z7L8 435 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 TRAM1L1Q8N609 369 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 TEX26Q8N6G2 289 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 ZFPM2Q8WW38 1151 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 GLYATL1Q969I3 302 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 TIGD1Q96MW7 591 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 FOXC2Q99958 501 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 TREX2Q9BQ50 279 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 ZSCAN5AQ9BUG6 496 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 SPATA16Q9BXB7 569 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 LHPPQ9H008 270 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 SLC6A20Q9NP91 592 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 NT5MQ9NPB1 228 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 DLL4Q9NR61 685 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 CWC15Q9P013 229 aaKnown RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 IFT80Q9P2H3 777 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 TNFRSF10DQ9UBN6 386 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 SEC14L3Q9UDX4 400 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 SH3BGRL2Q9UJC5 107 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 NOCTQ9UK39 431 aaKnown RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 FBXL4Q9UKA2 621 aa6.61□□□□□ -1.35
ATXN3-236ENST00000556220 RPH3AQ9Y2J0 694 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 FN1P02751 2386 aaKnown RBP6.61□□□□□ -1.35
ATXN3-236ENST00000556220 TRAV17A0A0B4J275 112 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 ANKRD62A6NC57 917 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 F8VZ95 297 aa6.6□□□□□ -1.35
ATXN3-236ENST00000556220 CNOT3O75175 753 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms