RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 AASSQ9UDR5 926 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF222Q9UK12 451 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 GMEB1Q9Y692 573 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 NT5C1B-RDH14C9J2C7 533 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 AK1P00568 194 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF3P17036 446 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 KCNJ2P63252 427 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ABATP80404 500 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ABHD18Q0P651 414 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 IQCCQ4KMZ1 466 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 FRG2Q64ET8 278 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 GK5Q6ZS86 529 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 KBTBD2Q8IY47 623 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 CADM2Q8N3J6 435 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ANKFN1Q8N957 763 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 GOLM1Q8NBJ4 401 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TMIEQ8NEW7 156 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 BPIFB1Q8TDL5 484 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 DNAJA4Q8WW22 397 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 NCSTNQ92542 709 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 PSMG2Q969U7 264 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 FRG2BQ96QU4 278 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TUBA1CQ9BQE3 449 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 LPIN3Q9BQK8 851 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 DERL2Q9GZP9 239 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TMEM45AQ9NWC5 275 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 OXSMQ9NWU1 459 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 CIDEBQ9UHD4 219 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 EGFL7Q9UHF1 273 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 MYBPHLA2RUH7 354 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 E2F3O00716 465 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 OR4F21O95013 312 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 GADD45AP24522 165 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 PTGIRP43119 386 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 TAS2R39P59534 338 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ST3GAL3Q11203 375 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 GK3PQ14409 553 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 SEMA3AQ14563 771 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 TUBA3EQ6PEY2 450 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 SCIMPQ6UWF3 145 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 CAND1Q86VP6 1230 aaKnown RBP10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ASB9Q96DX5 294 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 POLR2J3Q9H1A7 115 aaKnown RBP10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ARL8BQ9NVJ2 186 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 CLCA3PQ9Y6N3 262 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 LCHNA4D1U4 455 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 AIREO43918 545 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 RBMXL2O75526 392 aaKnown RBP10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ALPIP09923 528 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 SLC13A2Q13183 592 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 TRAM1Q15629 374 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 CLEC20AQ6ZU45 233 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 AMIGO1Q86WK6 493 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 RELL1Q8IUW5 271 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 MFSD3Q96ES6 412 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 DIRAS2Q96HU8 199 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 TSGA13Q96PP4 275 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 SYT17Q9BSW7 474 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF717Q9BY31 904 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-216ENST00000556083 BTBD1Q9H0C5 482 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 MCCC2Q9HCC0 563 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 PTTG2Q9NZH5 202 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 PRODH2Q9UF12 536 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 FZD9O00144 591 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 MATN2O00339 956 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ZBTB22O15209 634 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF208O43345 1280 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 DFNA5O60443 496 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 PSIP1O75475 530 aaKnown RBP10.5□□□□□ -0.73
ACTN1-216ENST00000556083 RAB36O95755 333 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 C7P10643 843 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ALAS2P22557 587 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 SHMT2P34897 504 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 NRIP1P48552 1158 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ATXN1P54253 815 aaKnown RBP10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.5□□□□□ -0.73
ACTN1-216ENST00000556083 PPP2R2DQ66LE6 453 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ANO7Q6IWH7 933 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.5□□□□□ -0.73
ACTN1-216ENST00000556083 FAM124AQ86V42 546 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 NRSN1Q8IZ57 195 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 GSTCDQ8NEC7 633 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF461Q8TAF7 563 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 KAT2AQ92830 837 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 CDKN2AIPNLQ96HQ2 116 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 MARK4Q96L34 752 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 FAM210AQ96ND0 272 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 NECTIN4Q96NY8 510 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 RMI1Q9H9A7 625 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 IFT46Q9NQC8 304 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 GLS2Q9UI32 602 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 PCDHGC4Q9Y5F7 938 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 STYXL1Q9Y6J8 313 aa10.5□□□□□ -0.73
ACTN1-216ENST00000556083 NRP1O14786 923 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 KDELR3O43731 214 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 NUDT1P36639 197 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 SMSP52788 366 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 DSTNP60981 165 aa10.49□□□□□ -0.73
ACTN1-216ENST00000556083 PPP2R2BQ00005 443 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms