RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 NAT6Q93015 286 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 ATP6V1E2Q96A05 226 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 RHBDF1Q96CC6 855 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 AHCYL2Q96HN2 611 aaKnown RBP10.88□□□□□ -0.67
SHMT2-220ENST00000555634 CNDP1Q96KN2 507 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 MIPEPQ99797 713 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 HAUS8Q9BT25 410 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 EDEM2Q9BV94 578 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 MANSC1Q9H8J5 431 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 PFDN4Q9NQP4 134 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 OR6C2Q9NZP2 312 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 STOX2Q9P2F5 926 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-220ENST00000555634 PNMA8BQ9ULN7 279 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-220ENST00000555634 SDK1Q7Z5N4 2213 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 PATE3B3GLJ2 98 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 G3V2L1 256 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 K7EPI3 171 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 MAP3K7O43318 606 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 KLK8O60259 260 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 NPHS1O60500 1241 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 ZNF806P0C7X5 589 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 IMPDH1P20839 514 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 PKLRP30613 574 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 NBL1P41271 181 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 HSPA7P48741 367 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 TCF15Q12870 199 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 LCP2Q13094 533 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 RCN2Q14257 317 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 GPR18Q14330 331 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 CCDC6Q16204 474 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 PLA2G2CQ5R387 149 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 PRAMEF14Q5SWL7 426 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 PRAMEF13Q5VWM6 474 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 FRMD7Q6ZUT3 714 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 AMIGO1Q86WK6 493 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 NAGSQ8N159 534 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 KYQ8NBH2 561 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 OR52E1Q8NGJ3 308 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 OR2L8Q8NGY9 312 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 OR10G6Q8NH81 332 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 DENND1AQ8TEH3 1009 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 CAMK1GQ96NX5 476 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 TMEM237Q96Q45 408 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 PKP4Q99569 1192 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 MECRQ9BV79 373 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 CD244Q9BZW8 370 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 C12orf65Q9H3J6 166 aaKnown RBP10.87□□□□□ -0.67
SHMT2-220ENST00000555634 SLC32A1Q9H598 525 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 UCK1Q9HA47 277 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 SLC40A1Q9NP59 571 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 TMEM9BQ9NQ34 198 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 ABCF3Q9NUQ8 709 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 DNAJC11Q9NVH1 559 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 INTS7Q9NVH2 962 aaKnown RBP10.87□□□□□ -0.67
SHMT2-220ENST00000555634 UCKL1Q9NWZ5 548 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 PCDHGB2Q9Y5G2 931 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 ENTPD2Q9Y5L3 495 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 KCNE2Q9Y6J6 123 aa10.87□□□□□ -0.67
SHMT2-220ENST00000555634 LNP1A1A4G5 178 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 GSAPA4D1B5 854 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 LILRA5A6NI73 299 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 C2orf74A8MZ97 194 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 TARM1B6A8C7 271 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 KLF11O14901 512 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 NUDT21O43809 227 aaKnown RBP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 DUX1O43812 170 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 FKBP9O95302 570 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 VIMP08670 466 aaKnown RBP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 RPS17P08708 135 aaKnown RBP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 TROVE2P10155 538 aaKnown RBP eCLIP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 GLB1P16278 677 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 AMD1P17707 334 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 GNAZP19086 355 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 BGNP21810 368 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 IMPA1P29218 277 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 CCNG1P51959 295 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 HK2P52789 917 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 EPHA4P54764 986 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 NAGLUP54802 743 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 WDR4P57081 412 aaKnown RBP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 GNGT1P63211 74 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 UBE2IP63279 158 aaKnown RBP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 PHEXP78562 749 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 GUCY1A3Q02108 690 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 CDC16Q13042 620 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 SLC14A1Q13336 389 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 GTF2H2Q13888 395 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 PCBP2Q15366 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 CSRP2Q16527 193 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 CYP2A13Q16696 494 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 PAGE2BQ5JRK9 111 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 ZNF678Q5SXM1 525 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 GTF2H2CQ6P1K8 395 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 MBOAT1Q6ZNC8 495 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 TMEM26Q6ZUK4 368 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 EFL1Q7Z2Z2 1120 aaKnown RBP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 C17orf64Q86WR6 236 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 MYLK4Q86YV6 388 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-220ENST00000555634 CRLF3Q8IUI8 442 aa10.86□□□□□ -0.67
SHMT2-220ENST00000555634 TEX9Q8N6V9 391 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms