RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 IDH3AP50213 366 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 PNLIPRP1P54315 467 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 PKNOX1P55347 436 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 C1orf61Q13536 156 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 RPE65Q16518 533 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 VWA5B1Q5TIE3 1220 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 LYSMD4Q5XG99 296 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 CLEC6AQ6EIG7 209 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 CEP68Q76N32 757 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 MILR1Q7Z6M3 343 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 TAF8Q7Z7C8 310 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 THOC6Q86W42 341 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 SPATS2Q86XZ4 545 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 NRROSQ86YC3 692 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 MAML2Q8IZL2 1156 aaPredicted RBP9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 RAB42Q8N4Z0 105 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 FBXL6Q8N531 539 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 LMNTD1Q8N9Z9 388 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 ZNF480Q8WV37 535 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 GAB3Q8WWW8 586 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 DNASE2BQ8WZ79 361 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 PPP1R36Q96LQ0 422 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 CAMK1GQ96NX5 476 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 IL17FQ96PD4 163 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 KCNA7Q96RP8 456 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 ZNF382Q96SR6 550 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 NUF2Q9BZD4 464 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 MVB12BQ9H7P6 319 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 CAAP1Q9H8G2 361 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 KCNK13Q9HB14 408 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 TNFRSF12AQ9NP84 129 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 SCHIP1Q9P0W5 487 aaPredicted RBP9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 TBC1D29Q9UFV1 150 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 APOBEC3BQ9UH17 382 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 POLG2Q9UHN1 485 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 KLF15Q9UIH9 416 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 LNPEPQ9UIQ6 1025 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 FBXO4Q9UKT5 387 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 APOBEC2Q9Y235 224 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 SLC22A14Q9Y267 594 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 COLEC10Q9Y6Z7 277 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 COL6A3P12111 3177 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 TECTAO75443 2155 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 TRIOO75962 3097 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 TRPC5OSA6NMA1 111 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 OR52A4PA6NMU1 304 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ZNF839A8K0R7 811 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ZNF195O14628 629 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 HGSO14964 777 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CLGNO14967 610 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 BCAT2O15382 392 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 KDM1AO60341 852 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 DCTN3O75935 186 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 EML2O95834 649 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CHEK2O96017 543 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 FGF4P08620 206 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 UROSP10746 265 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 MTHFD1P11586 935 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 HGFP14210 728 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ALOX15P16050 662 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 PRDX3P30048 256 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 HMOX2P30519 316 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 HSD17B2P37059 387 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CSNK1EP49674 416 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 NXPH1P58417 271 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ERVPABLB-1P60509 514 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 TBPL1P62380 186 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 BTKQ06187 659 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CDC16Q13042 620 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 GRB7Q14451 532 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 TEAD4Q15561 434 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ZXDCQ2QGD7 858 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 SLC9B1Q4ZJI4 515 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 THEMIS2Q5TEJ8 643 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 KANK2Q63ZY3 851 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 PMS2CLQ68D20 193 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 NXNQ6DKJ4 435 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CAPN13Q6MZZ7 669 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 FOXR1Q6PIV2 292 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 EPGNQ6UW88 154 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ABRAXAS1Q6UWZ7 409 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 WASH2PQ6VEQ5 465 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 ACAD11Q709F0 780 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 EFL1Q7Z2Z2 1120 aaKnown RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 MAVSQ7Z434 540 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 MYLK4Q86YV6 388 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 TRIM48Q8IWZ4 208 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 KLHDC8AQ8IYD2 350 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 C2orf73Q8N5S3 287 aaPredicted RBP9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CDYL2Q8N8U2 506 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 DCBLD1Q8N8Z6 715 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 OR4F6Q8NGB9 312 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 OR52B6Q8NGF0 335 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 OR56A3Q8NH54 315 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 METTL6Q8TCB7 284 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 MAPK15Q8TD08 544 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 GPBAR1Q8TDU6 330 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CCT6BQ92526 530 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CXorf40BQ96DE9 158 aa9.37□□□□□ -0.91
HNRNPC-220ENST00000555585 CDK15Q96Q40 435 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms