RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 TMEM150CB9EJG8 249 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 E5RI56 91 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 E7ESA3 106 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 H3BMH7 237 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 RASGRF2O14827 1237 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 PFDN6O15212 129 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 NKX2-8O15522 239 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 PIAS1O75925 651 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 TTC4O95801 387 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 AHSGP02765 367 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 PSMB5P28074 263 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 ATP5DP30049 168 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 CDKN2DP55273 166 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 ARL4CP56559 192 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 YBX1P67809 324 aaKnown RBP13.19□□□□□ -0.3
SNX6-203ENST00000555416 PDIA2Q13087 525 aaKnown RBP13.19□□□□□ -0.3
SNX6-203ENST00000555416 MAP7Q14244 749 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 FASTKQ14296 549 aaKnown RBP13.19□□□□□ -0.3
SNX6-203ENST00000555416 SLC5A12Q1EHB4 618 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 LINC00303Q3SY05 128 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 ATP1A1-AS1Q5TC04 95 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 FAM199XQ6PEV8 388 aaPredicted RBP13.19□□□□□ -0.3
SNX6-203ENST00000555416 CYHR1Q6ZMK1 362 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 ZNF572Q7Z3I7 529 aaPredicted RBP13.19□□□□□ -0.3
SNX6-203ENST00000555416 PIWIL4Q7Z3Z4 852 aaKnown RBP13.19□□□□□ -0.3
SNX6-203ENST00000555416 CNTN4Q8IWV2 1026 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 LMNTD2Q8IXW0 634 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 ESX1Q8N693 406 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 FBXO36Q8NEA4 188 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 GSDMBQ8TAX9 411 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 KCNJ9Q92806 393 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 UBL7Q96S82 380 aaPredicted RBP13.19□□□□□ -0.3
SNX6-203ENST00000555416 SEMA4CQ9C0C4 833 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 GPN2Q9H9Y4 310 aaPredicted RBP13.19□□□□□ -0.3
SNX6-203ENST00000555416 CROTQ9UKG9 612 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 VPS9D1Q9Y2B5 631 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 DHRS7Q9Y394 339 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 PSAT1Q9Y617 370 aa13.19□□□□□ -0.3
SNX6-203ENST00000555416 PIEZO2Q9H5I5 2752 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 A0A0J9YY10 115 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 ATXN7O15265 892 aaPredicted RBP13.18□□□□□ -0.3
SNX6-203ENST00000555416 NRP2O60462 931 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 PSIP1O75475 530 aaKnown RBP13.18□□□□□ -0.3
SNX6-203ENST00000555416 SCRG1O75711 98 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 RPN2P04844 631 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 MAGP20916 626 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 GPS2Q13227 327 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 LY6DQ14210 128 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 KIR2DS3Q14952 304 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 TMTC4Q5T4D3 741 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 TMEM126BQ8IUX1 230 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 CPNE9Q8IYJ1 553 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 DNAJC22Q8N4W6 341 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 CT55Q8WUE5 264 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 DLG3Q92796 817 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 EXTL1Q92935 676 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 RAD51AP1Q96B01 352 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 SLC45A3Q96JT2 553 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 FCRL4Q96PJ5 515 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 PKP4Q99569 1192 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 NAT9Q9BTE0 207 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 SPRTNQ9H040 489 aaPredicted RBP13.18□□□□□ -0.3
SNX6-203ENST00000555416 SLC39A10Q9ULF5 831 aa13.18□□□□□ -0.3
SNX6-203ENST00000555416 SMAPO00193 183 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 C1QL1O75973 258 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 FURINP09958 794 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 MSL3P1P0C860 447 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 PRKAR1AP10644 381 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 ERGP11308 486 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 MCM3P25205 808 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 DLSTP36957 453 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 RHDQ02161 417 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 CBLBQ13191 982 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 CYP2A13Q16696 494 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 FCRL6Q6DN72 434 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 CAPN12Q6ZSI9 719 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 EXD3Q8N9H8 876 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 ASB11Q8WXH4 323 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 INPP5DQ92835 1189 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 LRRC39Q96DD0 335 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 TCTN2Q96GX1 697 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 CCDC68Q9H2F9 335 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 PPANQ9NQ55 473 aaKnown RBP13.17□□□□□ -0.3
SNX6-203ENST00000555416 LHX9Q9NQ69 397 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 SMYD2Q9NRG4 433 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 MOCS1Q9NZB8 636 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 WHRNQ9P202 907 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 KLHL42Q9P2K6 505 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 CDC23Q9UJX2 597 aa13.17□□□□□ -0.3
SNX6-203ENST00000555416 GFYI3L273 518 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 ERVH48-1M5A8F1 160 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 MYO1CO00159 1063 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 URI1O94763 535 aaPredicted RBP13.16□□□□□ -0.3
SNX6-203ENST00000555416 OAS2P29728 719 aaKnown RBP13.16□□□□□ -0.3
SNX6-203ENST00000555416 RORAP35398 523 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 CCNFP41002 786 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 GRIA3P42263 894 aa13.16□□□□□ -0.3
SNX6-203ENST00000555416 RPS18P62269 152 aaKnown RBP13.16□□□□□ -0.3
SNX6-203ENST00000555416 SLC7A5Q01650 507 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms