RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 KRT222Q8N1A0 295 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 SLC35F6Q8N357 371 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 OTUD6BQ8N6M0 293 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 NAT8LQ8N9F0 302 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 CALML6Q8TD86 181 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 ADAMTS17Q8TE56 1095 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 ZUFSPQ96AP4 578 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 ABHD17AQ96GS6 310 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 MS4A14Q96JA4 679 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 SERPINB12Q96P63 405 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 IP6K3Q96PC2 410 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 NRTNQ99748 197 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 FAM60AQ9NP50 221 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 SPATA7Q9P0W8 599 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 TCFL5Q9UL49 500 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 SLC39A10Q9ULF5 831 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 PADI2Q9Y2J8 665 aa11.41□□□□□ -0.58
VRK1-204ENST00000555351 ZCWPW2A0A1B0GU75 182 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 C9J4A7 227 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 ZSCAN9O15535 394 aaPredicted RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 AVILO75366 819 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 ONECUT2O95948 504 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 PKMP14618 531 aaKnown RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 HSD17B2P37059 387 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 VPS41P49754 854 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 CSRP3P50461 194 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 ARSFP54793 590 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 CSE1LP55060 971 aaKnown RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 THOC5Q13769 683 aaKnown RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 DHX34Q14147 1143 aaKnown RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 ARHGAP19Q14CB8 494 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 NCF4Q15080 339 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 TTLL9Q3SXZ7 439 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 LACTB2Q53H82 288 aaPredicted RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 ZC3H12BQ5HYM0 836 aaKnown RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 TCTE1Q5JU00 501 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 ATP1A1-AS1Q5TC04 95 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 CASC4Q6P4E1 433 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 FAM198BQ6UWH4 519 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 CES3Q6UWW8 571 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 CENPUQ71F23 418 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 PRICKLE2Q7Z3G6 844 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 PCGF5Q86SE9 256 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 TRIM73Q86UV7 250 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 HPS6Q86YV9 775 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 ENDOVQ8N8Q3 282 aaKnown RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 LMNTD1Q8N9Z9 388 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 FBXO15Q8NCQ5 510 aaPredicted RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 GABPB2Q8TAK5 448 aaPredicted RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 COG1Q8WTW3 980 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 DLG3Q92796 817 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 KCNJ9Q92806 393 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 NACC2Q96BF6 587 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 NAT9Q9BTE0 207 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 FAM114A2Q9NRY5 505 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 PCYOX1Q9UHG3 505 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 SNX7Q9UNH6 387 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 PCDHGB7Q9Y5F8 929 aa11.4□□□□□ -0.58
VRK1-204ENST00000555351 PCDHGA9Q9Y5G4 932 aaKnown RBP11.4□□□□□ -0.58
VRK1-204ENST00000555351 SMAPO00193 183 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 EIF3FO00303 357 aaPredicted RBP11.39□□□□□ -0.59
VRK1-204ENST00000555351 SRPX2O60687 465 aaPredicted RBP11.39□□□□□ -0.59
VRK1-204ENST00000555351 WISP1O95388 367 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 TTC4O95801 387 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 IGHEP01854 428 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 ERGP11308 486 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 ENO3P13929 434 aaPredicted RBP11.39□□□□□ -0.59
VRK1-204ENST00000555351 CHRM3P20309 590 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 MAGP20916 626 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 FMO4P31512 558 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 CASRP41180 1078 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 GCGRP47871 477 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 CYP2A13Q16696 494 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 LONRF1Q17RB8 773 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 RNASEH2BQ5TBB1 312 aaKnown RBP11.39□□□□□ -0.59
VRK1-204ENST00000555351 PRAMEF17Q5VTA0 474 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 ZNF470Q6ECI4 717 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 SYDE1Q6ZW31 735 aaPredicted RBP11.39□□□□□ -0.59
VRK1-204ENST00000555351 ZBTB2Q8N680 514 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 CFAP61Q8NHU2 1237 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 ANP32BQ92688 251 aaKnown RBP11.39□□□□□ -0.59
VRK1-204ENST00000555351 SIGLEC10Q96LC7 697 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 ZNF285Q96NJ3 590 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 RUNDC3BQ96NL0 473 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 GBP5Q96PP8 586 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 NDC1Q9BTX1 674 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 KCNF1Q9H3M0 494 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 MLXIPLQ9NP71 852 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 EURLQ9NYK6 297 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 IL1RAPL1Q9NZN1 696 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 PLAGL1Q9UM63 463 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 FAM169AQ9Y6X4 670 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 BOD1L1Q8NFC6 3051 aa11.39□□□□□ -0.59
VRK1-204ENST00000555351 ZNF839A8K0R7 811 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 GOLGA8KD6RF30 607 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 E5RI56 91 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 GOLGA8TH3BQL2 631 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 MYO1CO00159 1063 aa11.38□□□□□ -0.59
VRK1-204ENST00000555351 NIPSNAP2O75323 286 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms