RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CROTQ9UKG9 612 aa16.97■□□□□ 0.31
SHOX-204ENST00000554971 OR1A2Q9Y585 309 aa16.97■□□□□ 0.31
SHOX-204ENST00000554971 OR51F1A6NGY5 319 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 EIF4E1BA6NMX2 242 aaKnown RBP16.96■□□□□ 0.31
SHOX-204ENST00000554971 FADS2P1A8MWK0 482 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 STX16-NPEPL1H3BU86 382 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 STX16O14662 325 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 STAMBPO95630 424 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 MTHFD2P13995 350 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 LPOP22079 712 aaPredicted RBP16.96■□□□□ 0.31
SHOX-204ENST00000554971 TGM1P22735 817 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 CA5AP35218 305 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 CHN2P52757 468 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 DCDC1P59894 354 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 PFN3P60673 137 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 MRPS22P82650 360 aaKnown RBP16.96■□□□□ 0.31
SHOX-204ENST00000554971 RHDQ02161 417 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 PDK3Q15120 406 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 KANK2Q63ZY3 851 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 PNCKQ6P2M8 343 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 ZNF765Q7L2R6 523 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 HOMEZQ8IX15 550 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 NRSN1Q8IZ57 195 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 GOLM1Q8NBJ4 401 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 HMGCLL1Q8TB92 370 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 LPGAT1Q92604 370 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 DCUN1D1Q96GG9 259 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 MARK4Q96L34 752 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 LGR4Q9BXB1 951 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 NUSAP1Q9BXS6 441 aaKnown RBP16.96■□□□□ 0.31
SHOX-204ENST00000554971 FAM83DQ9H4H8 585 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 CAPN10Q9HC96 672 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 TNFRSF12AQ9NP84 129 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 TMEM181Q9P2C4 612 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 CD300AQ9UGN4 299 aa16.96■□□□□ 0.31
SHOX-204ENST00000554971 ARHGEF17Q96PE2 2063 aaPredicted RBP16.96■□□□□ 0.31
SHOX-204ENST00000554971 A0A1B0GTW7 788 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 FBP2O00757 339 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 MRASO14807 208 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 NDUFS3O75489 264 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 CDK14O94921 469 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 MATN4O95460 622 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 TTPAP49638 278 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 ADARP55265 1226 aaKnown RBP16.96■□□□□ 0.3
SHOX-204ENST00000554971 SH3BGRP55822 239 aaPredicted RBP16.96■□□□□ 0.3
SHOX-204ENST00000554971 SH3BP2P78314 561 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 LCP2Q13094 533 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 LRRC36Q1X8D7 754 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 PIM3Q86V86 326 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 NLRP8Q86W28 1048 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 PLEKHG4BQ96PX9 1271 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 C19orf43Q9BQ61 176 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 EFHD1Q9BUP0 239 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 C1QTNF7Q9BXJ2 289 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 YIPF3Q9GZM5 350 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 TMPRSS11EQ9UL52 423 aa16.96■□□□□ 0.3
SHOX-204ENST00000554971 PNMA8BQ9ULN7 279 aaPredicted RBP16.96■□□□□ 0.3
SHOX-204ENST00000554971 FNDC3AQ9Y2H6 1198 aaKnown RBP16.96■□□□□ 0.3
SHOX-204ENST00000554971 OAS3Q9Y6K5 1087 aaKnown RBP16.96■□□□□ 0.3
SHOX-204ENST00000554971 ZFC3H1O60293 1989 aaKnown RBP16.95■□□□□ 0.3
SHOX-204ENST00000554971 FPGTO14772 594 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 STX7O15400 261 aaKnown RBP16.95■□□□□ 0.3
SHOX-204ENST00000554971 KLK8O60259 260 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 SRP72O76094 671 aaKnown RBP16.95■□□□□ 0.3
SHOX-204ENST00000554971 GPX3P22352 226 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 SEMA3AQ14563 771 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 TRIM61Q5EBN2 209 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 AARS2Q5JTZ9 985 aaKnown RBP16.95■□□□□ 0.3
SHOX-204ENST00000554971 ANKS6Q68DC2 871 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 SLC23A3Q6PIS1 610 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 CYHR1Q6ZMK1 362 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 Q6ZSR6 202 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 CHCHD4Q8N4Q1 142 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 MFSD2AQ8NA29 543 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 PARD6AQ9NPB6 346 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 CCDC167Q9P0B6 97 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 FKBPLQ9UIM3 349 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 CNOT6Q9ULM6 557 aaKnown RBP16.95■□□□□ 0.3
SHOX-204ENST00000554971 FIS1Q9Y3D6 152 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 PKP3Q9Y446 797 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 DNAJC15Q9Y5T4 150 aa16.95■□□□□ 0.3
SHOX-204ENST00000554971 A0A1B0GVT2 93 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 E7ENX8 843 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 H7C0S8 307 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 MLYCDO95822 493 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 THEGLP0DJG4 465 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 GNSP15586 552 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 LBPP18428 481 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 FOXM1Q08050 763 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 DUOXA1Q1HG43 343 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 RAET1GQ6H3X3 334 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 OGFOD2Q6N063 350 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 SPATA19Q7Z5L4 167 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 SPATA24Q86W54 205 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.94■□□□□ 0.3
SHOX-204ENST00000554971 AKTIPQ9H8T0 292 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 MID1IP1Q9NPA3 183 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 KCTD5Q9NXV2 234 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 SUSD2Q9UGT4 822 aa16.94■□□□□ 0.3
SHOX-204ENST00000554971 VILLO15195 856 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms