RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 PTENP60484 403 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 RPS3AP61247 264 aaKnown RBP5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 HTD2P86397 168 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 CYP24A1Q07973 514 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 CUL1Q13616 776 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 THOC5Q13769 683 aaKnown RBP5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 ARHGEF16Q5VV41 709 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 C11orf63Q6NUN7 778 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 SLC2A7Q6PXP3 512 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 LRIG3Q6UXM1 1119 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 C15orf39Q6ZRI6 1047 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 SEPT14Q6ZU15 432 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 IKBIPQ70UQ0 350 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 DEFB128Q7Z7B8 93 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 ADCK1Q86TW2 530 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 RFX6Q8HWS3 928 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 RHPN2Q8IUC4 686 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 UEVLDQ8IX04 471 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 ENDOVQ8N8Q3 282 aaKnown RBP5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 POMGNT2Q8NAT1 580 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 ATP8B4Q8TF62 1192 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 CD101Q93033 1021 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 FAM162AQ96A26 154 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 VPS33AQ96AX1 596 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 SAAL1Q96ER3 474 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 SIPA1Q96FS4 1042 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 DACH2Q96NX9 599 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 RAB3IPQ96QF0 476 aaPredicted RBP5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 FCRL5Q96RD9 977 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 NPAS1Q99742 590 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 KIFC3Q9BVG8 833 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 CARD9Q9H257 536 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 TMBIM4Q9HC24 238 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 MID1IP1Q9NPA3 183 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 ACP6Q9NPH0 428 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 THAP1Q9NVV9 213 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 THEGQ9P2T0 379 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 KLQ9UEF7 1012 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 LCMT1Q9UIC8 334 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 EXOC7Q9UPT5 735 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 KLHL20Q9Y2M5 609 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 LYVE1Q9Y5Y7 322 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 ALG6Q9Y672 507 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 ADGRA3Q8IWK6 1321 aa5.16□□□□□ -1.58
MTHFD1-206ENST00000554353 MICAL3Q7RTP6 2002 aa5.15□□□□□ -1.58
MTHFD1-206ENST00000554353 ARPC4-TTLL3A0A0A6YYG9 625 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 RNF103-CHMP3A0A140T963 221 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 DENND3A2RUS2 1198 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 RGSL1A5PLK6 1076 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 NPIPB13A6NJU9 1138 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 NPIPB5A8MRT5 1133 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 A8MXE2 369 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 NPIPB4C9JG80 1138 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 RNF103O00237 685 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 PGRMC2O15173 223 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 TTI1O43156 1089 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 SMPD2O60906 423 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 METTL18O95568 372 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 GGPS1O95749 300 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 KRT14P02533 472 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 FGGP02679 453 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 CA3P07451 260 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 IVLP07476 585 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 WEE2P0C1S8 567 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 IQCF3P0C7M6 154 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 UBL4AP11441 157 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 CYP11B1P15538 503 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 ST6GAL1P15907 406 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 TGM2P21980 687 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 KCNA5P22460 613 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 CTNNA2P26232 953 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 AVPR2P30518 371 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 GTF2H1P32780 548 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 ICAM3P32942 547 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 RFC2P35250 354 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 HSD17B3P37058 310 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 MARCKSL1P49006 195 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 YPEL5P62699 121 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 MRPS5P82675 430 aaKnown RBP5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 TFF2Q03403 129 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 CETN1Q12798 172 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 NFE2L1Q14494 772 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 SIX1Q15475 284 aaPredicted RBP5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 SNRNP35Q16560 246 aaKnown RBP5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 PTGISQ16647 500 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 KCTD19Q17RG1 926 aaPredicted RBP5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 KBTBD12Q3ZCT8 623 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 ARL13AQ5H913 290 aaPredicted RBP5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 DUPD1Q68J44 220 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 KRT39Q6A163 491 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 AADACL2Q6P093 401 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 CYP20A1Q6UW02 462 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 KDM7AQ6ZMT4 941 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 LEKR1Q6ZMV7 388 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 SLC47A2Q86VL8 602 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 TMEM200AQ86VY9 491 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 CCDC60Q8IWA6 550 aaPredicted RBP5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 GPD1LQ8N335 351 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 PRELID2Q8N945 189 aa5.15□□□□□ -1.59
MTHFD1-206ENST00000554353 FAM98AQ8NCA5 519 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms