RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ACTRT1Q8TDG2 376 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 UBE2Q2Q8WVN8 375 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 SIGLEC10Q96LC7 697 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 CATSPER2Q96P56 530 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 WDR83Q9BRX9 315 aaKnown RBP17.55■□□□□ 0.4
SHMT2-206ENST00000553529 EPN3Q9H201 632 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 FANCEQ9HB96 536 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 LATS2Q9NRM7 1088 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 HOMER3Q9NSC5 361 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 OR6C2Q9NZP2 312 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 POLG2Q9UHN1 485 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 TLK1Q9UKI8 766 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 FARSAQ9Y285 508 aaKnown RBP17.55■□□□□ 0.4
SHMT2-206ENST00000553529 MAN2B2Q9Y2E5 1009 aa17.55■□□□□ 0.4
SHMT2-206ENST00000553529 HEMK1Q9Y5R4 338 aaPredicted RBP17.55■□□□□ 0.4
SHMT2-206ENST00000553529 TENM4Q6N022 2769 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 A0A1W2PPV9 198 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 E7EQ34 232 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 RASGRF2O14827 1237 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 NRDCO43847 1150 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 OR2B3O76000 313 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 MT-ND3P03897 115 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 SLC1A2P43004 574 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 GBX1Q14549 363 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 RNASEH2BQ5TBB1 312 aaKnown RBP17.54■□□□□ 0.4
SHMT2-206ENST00000553529 NEPROQ6NW34 567 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 OTOAQ7RTW8 1153 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 C17orf53Q8N3J3 647 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-206ENST00000553529 METTL27Q8N6F8 245 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-206ENST00000553529 ADAMTS17Q8TE56 1095 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.54■□□□□ 0.4
SHMT2-206ENST00000553529 PLAC1Q9HBJ0 212 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 KCND3Q9UK17 655 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 POLHQ9Y253 713 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 MAD1L1Q9Y6D9 718 aa17.54■□□□□ 0.4
SHMT2-206ENST00000553529 ARHGEF33A8MVX0 844 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 C21orf140B9A014 251 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 PRICKLE3O43900 615 aaPredicted RBP17.53■□□□□ 0.4
SHMT2-206ENST00000553529 CTSVO60911 334 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 CDK16Q00536 496 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 MC1RQ01726 317 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 TMED2Q15363 201 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 UGT8Q16880 541 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 SLC5A12Q1EHB4 618 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 IZUMO3Q5VZ72 239 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 UNC5DQ6UXZ4 953 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 HOOK3Q86VS8 718 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 BPHLQ86WA6 291 aaPredicted RBP17.53■□□□□ 0.4
SHMT2-206ENST00000553529 KLHL7Q8IXQ5 586 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 PPFIBP2Q8ND30 876 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 OR2L8Q8NGY9 312 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 MIPEPQ99797 713 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 MESP1Q9BRJ9 268 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 TRIM51Q9BSJ1 452 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 ADNPQ9H2P0 1102 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 SLC22A11Q9NSA0 550 aa17.53■□□□□ 0.4
SHMT2-206ENST00000553529 FAM237BA0A1B0GVD1 139 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SDR42E2A6NKP2 422 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 HAUS5O94927 633 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 CHRM3P20309 590 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 OGNP20774 298 aaKnown RBP17.52■□□□□ 0.4
SHMT2-206ENST00000553529 CLCN7P51798 805 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 RPS15P62841 145 aaKnown RBP17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SNRPNP63162 240 aaKnown RBP17.52■□□□□ 0.4
SHMT2-206ENST00000553529 PLOD1Q02809 727 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-206ENST00000553529 TLE1Q04724 770 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 DHX9Q08211 1270 aaKnown RBP17.52■□□□□ 0.4
SHMT2-206ENST00000553529 RAPSNQ13702 412 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 KIR2DS3Q14952 304 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 IGFBP7Q16270 282 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 KLHL38Q2WGJ6 581 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 FRMPD2BQ6IN97 320 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 MRNIPQ6NTE8 343 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 CYB5D1Q6P9G0 228 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SUSD1Q6UWL2 747 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SHISA5Q8N114 240 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 ZBTB2Q8N680 514 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 AMER2Q8N7J2 671 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 MCUQ8NE86 351 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 OR8K5Q8NH50 307 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 TCTN2Q96GX1 697 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 LRFN5Q96NI6 719 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 GBP5Q96PP8 586 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 PANX3Q96QZ0 392 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 NDNQ99608 321 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 ACAT2Q9BWD1 397 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 TSSK1BQ9BXA7 367 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SLC7A5P2Q9GIP4 190 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 C20orf96Q9NUD7 363 aaPredicted RBP17.52■□□□□ 0.4
SHMT2-206ENST00000553529 IRAK4Q9NWZ3 460 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SAMD15Q9P1V8 674 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SERTAD3Q9UJW9 196 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 TCFL5Q9UL49 500 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SLC39A10Q9ULF5 831 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 SNX7Q9UNH6 387 aa17.52■□□□□ 0.4
SHMT2-206ENST00000553529 MED13Q9UHV7 2174 aa17.52■□□□□ 0.39
SHMT2-206ENST00000553529 ZSCAN9O15535 394 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 ALOX12BO75342 701 aa17.51■□□□□ 0.39
SHMT2-206ENST00000553529 KLK3P07288 261 aaPredicted RBP17.51■□□□□ 0.39
SHMT2-206ENST00000553529 MSL3P1P0C860 447 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms