RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 FAM171A1Q5VUB5 890 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 Q6ZPB1 254 aaPredicted RBP11.1□□□□□ -0.63
NRDE2-202ENST00000553409 ATG16L2Q8NAA4 619 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 SIDT2Q8NBJ9 832 aaKnown RBP11.1□□□□□ -0.63
NRDE2-202ENST00000553409 EEF1AKMT1Q8WVE0 214 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 TMEM40Q8WWA1 233 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 SMARCD1Q96GM5 515 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 SH3GL1Q99961 368 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 ARPC5LQ9BPX5 153 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 ZFP14Q9HCL3 533 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 KRT84Q9NSB2 600 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 ZMYM5Q9UJ78 669 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 PDCD11Q14690 1871 aaKnown RBP11.1□□□□□ -0.63
NRDE2-202ENST00000553409 RALGAPA2Q2PPJ7 1873 aa11.1□□□□□ -0.63
NRDE2-202ENST00000553409 SLC12A8A0AV02 714 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CAPN5O15484 640 aaPredicted RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 APBA3O96018 575 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 ENDOUP21128 410 aaKnown RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CDKN1CP49918 316 aaPredicted RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 GZMMP51124 257 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 PTPRNQ16849 979 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 TYSND1Q2T9J0 566 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 ZNF517Q6ZMY9 492 aaPredicted RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 GALNT10Q86SR1 603 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CCDC190Q86UF4 302 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 P3H2Q8IVL5 708 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 OR8H2Q8N162 312 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CLHC1Q8NHS4 586 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CDKN2AIPNLQ96HQ2 116 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 OR2A14Q96R47 310 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 DPY30Q9C005 99 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CLPBQ9H078 707 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 SIRT5Q9NXA8 310 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 TSR3Q9UJK0 312 aaKnown RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 LYVE1Q9Y5Y7 322 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 LOC110117498-PIK3R3F6TDL0 507 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 PTGESO14684 152 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 VIPP01282 170 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 UGT2B15P54855 530 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 FAM214AQ32MH5 1076 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 WDR45BQ5MNZ6 344 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 ZNF438Q7Z4V0 828 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 MILR1Q7Z6M3 343 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CALHM3Q86XJ0 350 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CYP4Z2PQ8N1L4 340 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 KBTBD8Q8NFY9 601 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 FCGR1BQ92637 280 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 OR52E6Q96RD3 313 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 PHOX2BQ99453 314 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CRNNQ9UBG3 495 aaPredicted RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CPA4Q9UI42 421 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 SNX8Q9Y5X2 465 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 TRBV5-3A0A0A0MS03 114 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 PNMA8CA0A1B0GUJ8 204 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 KRT87PA6NCN2 255 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 GOLGA8CPA6NN73 597 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 FAM220BPB1ANY3 271 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 NIPSNAP2O75323 286 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 B3GALT4O96024 378 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 HMGB2P26583 209 aaKnown RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 HMGCS1Q01581 520 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 SLAMF1Q13291 335 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 IRF3Q14653 427 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 TBCEQ15813 527 aaPredicted RBP11.09□□□□□ -0.63
NRDE2-202ENST00000553409 DDR2Q16832 855 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 MYLPFQ96A32 169 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 EGLN2Q96KS0 407 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 GDF15Q99988 308 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 KCNS3Q9BQ31 491 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 KIF17Q9P2E2 1029 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 CCL27Q9Y4X3 112 aa11.09□□□□□ -0.63
NRDE2-202ENST00000553409 LINC00854A0A1B0GVQ3 168 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 OR7A17O14581 309 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 MUSKO15146 869 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 NDUFS3O75489 264 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 CYP7B1O75881 506 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 DARSP14868 501 aaKnown RBP11.08□□□□□ -0.64
NRDE2-202ENST00000553409 IL1RNP18510 177 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 DNAJA1P31689 397 aaKnown RBP11.08□□□□□ -0.64
NRDE2-202ENST00000553409 CA5AP35218 305 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 GPLD1P80108 840 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 NPRL3Q12980 569 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 TP53BP2Q13625 1128 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 UBXN11Q5T124 520 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 ATG9BQ674R7 924 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 C11orf74Q86VG3 221 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 PLPP6Q8IY26 295 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 LIX1Q8N485 282 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 NKAPQ8N5F7 415 aaKnown RBP11.08□□□□□ -0.64
NRDE2-202ENST00000553409 PPTC7Q8NI37 304 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 JPH3Q8WXH2 748 aaPredicted RBP11.08□□□□□ -0.64
NRDE2-202ENST00000553409 LINGO1Q96FE5 620 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 FYTTD1Q96QD9 318 aaKnown RBP11.08□□□□□ -0.64
NRDE2-202ENST00000553409 SEMA3CQ99985 751 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 IL1RAPQ9NPH3 570 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 SAMHD1Q9Y3Z3 626 aaKnown RBP11.08□□□□□ -0.64
NRDE2-202ENST00000553409 IPPQ9Y573 584 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.64
NRDE2-202ENST00000553409 LOC105371267A0A1B0GV96 52 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms