RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ZIC1Q15915 447 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 MRPL14Q6P1L8 145 aaKnown RBP11.43□□□□□ -0.58
CKAP4-202ENST00000552828 ZNF449Q6P9G9 518 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 SYT10Q6XYQ8 523 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 CLEC1AQ8NC01 280 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 OR52K1Q8NGK4 314 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 OR2Y1Q8NGV0 311 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 FLVCR1-AS1Q8TAF5 88 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 PROKR1Q8TCW9 393 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 NACC2Q96BF6 587 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 SLC7A5P2Q9GIP4 190 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 KLHL25Q9H0H3 589 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 XKR8Q9H6D3 395 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 ZNF552Q9H707 407 aaPredicted RBP11.43□□□□□ -0.58
CKAP4-202ENST00000552828 ASF1BQ9NVP2 202 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 ICKQ9UPZ9 632 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 SLC5A6Q9Y289 635 aa11.43□□□□□ -0.58
CKAP4-202ENST00000552828 SPTBP11277 2137 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 CCDC188H7C350 402 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 AP3B1O00203 1094 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 PEX12O00623 359 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 CCL22O00626 93 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 CNOT3O75175 753 aaKnown RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 OR2B3O76000 313 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 IPO13O94829 963 aaKnown RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 AP2A2O94973 939 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 TPBGLP0DKB5 382 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 UGT2B7P16662 529 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 PSMA3P25788 255 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 ACADLP28330 430 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 MC4RP32245 332 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 SHMT2P34897 504 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 DCTP40126 519 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 VPS41P49754 854 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 CDKN1CP49918 316 aaPredicted RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 TMPRSS15P98073 1019 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 CDK16Q00536 496 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 PRKG2Q13237 762 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 POU6F1Q14863 301 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 PPP1R7Q15435 360 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 ZRANB3Q5FWF4 1079 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 MLIPQ5VWP3 458 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 LYPLAL1Q5VWZ2 237 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 ZNF787Q6DD87 383 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 UNC5AQ6ZN44 842 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 Q6ZS92 163 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 PPP1R32Q7Z5V6 425 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 SERPINA9Q86WD7 417 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 CISD2Q8N5K1 135 aaKnown RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 CLDN19Q8N6F1 224 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 C19orf47Q8N9M1 422 aaKnown RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 INPP5DQ92835 1189 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 PTERQ96BW5 349 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 DNAJC1Q96KC8 554 aaKnown RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 RUNDC3BQ96NL0 473 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 OR2A14Q96R47 310 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 RANBP9Q96S59 729 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 HGH1Q9BTY7 390 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 SPRTNQ9H040 489 aaPredicted RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 DDX47Q9H0S4 455 aaKnown RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 NLE1Q9NVX2 485 aaPredicted RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 PIH1D1Q9NWS0 290 aaKnown RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 P4HTMQ9NXG6 502 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 OR6C2Q9NZP2 312 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 MAP10Q9P2G4 905 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 PTRH2Q9Y3E5 179 aaKnown RBP11.42□□□□□ -0.58
CKAP4-202ENST00000552828 POLEQ07864 2286 aa11.42□□□□□ -0.58
CKAP4-202ENST00000552828 ANKUB1A6NFN9 424 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 ENO4A6NNW6 628 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 LIN7AO14910 233 aaPredicted RBP11.41□□□□□ -0.58
CKAP4-202ENST00000552828 ZSCAN9O15535 394 aaPredicted RBP11.41□□□□□ -0.58
CKAP4-202ENST00000552828 ONECUT2O95948 504 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 UMODP07911 640 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 CHRM5P08912 532 aaPredicted RBP11.41□□□□□ -0.58
CKAP4-202ENST00000552828 TPSB2P20231 275 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 COL8A1P27658 744 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 FOLR3P41439 243 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 GRIA1P42261 906 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 GCGRP47871 477 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 SARNPP82979 210 aaKnown RBP11.41□□□□□ -0.58
CKAP4-202ENST00000552828 TPSAB1Q15661 275 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 TLDC1Q6P9B6 456 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 TICAM1Q8IUC6 712 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 KLHL7Q8IXQ5 586 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 PIANPQ8IYJ0 282 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 DNAJC22Q8N4W6 341 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 OR5AR1Q8NGP9 310 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 STYXQ8WUJ0 223 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 TM9SF4Q92544 642 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 SLCO2A1Q92959 643 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 C16orf45Q96MC5 204 aaPredicted RBP11.41□□□□□ -0.58
CKAP4-202ENST00000552828 C5orf34Q96MH7 638 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 SPHK1Q9NYA1 384 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 IFT80Q9P2H3 777 aaPredicted RBP11.41□□□□□ -0.58
CKAP4-202ENST00000552828 PCYOX1Q9UHG3 505 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 POLG2Q9UHN1 485 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 GPN3Q9UHW5 284 aaPredicted RBP11.41□□□□□ -0.58
CKAP4-202ENST00000552828 SRPK3Q9UPE1 567 aa11.41□□□□□ -0.58
CKAP4-202ENST00000552828 NEU2Q9Y3R4 380 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms