RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 M0R3G1 203 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 INSIG1O15503 277 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 FFAR2O15552 330 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 KDM1AO60341 852 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 ZNF623O75123 536 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 MYO1DO94832 1006 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 SCELO95171 688 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 LCKP06239 509 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 HOXB9P17482 250 aaPredicted RBP5.3□□□□□ -1.56
LIMA1-212ENST00000552491 TYMPP19971 482 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 MSH3P20585 1137 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 TACR2P21452 398 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 LPOP22079 712 aaPredicted RBP5.3□□□□□ -1.56
LIMA1-212ENST00000552491 PAX3P23760 479 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 IGFBP5P24593 272 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 PSMB9P28065 219 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 CD40LGP29965 261 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 HOXA9P31269 272 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 TGFBR2P37173 567 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 SGSHP51688 502 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 YBEYP58557 167 aaPredicted RBP5.3□□□□□ -1.56
LIMA1-212ENST00000552491 RPS24P62847 133 aaKnown RBP5.3□□□□□ -1.56
LIMA1-212ENST00000552491 IL1RL1Q01638 556 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 TAF10Q12962 218 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 ACOX1Q15067 660 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 PHKG1Q16816 387 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 DGUOKQ16854 277 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 RFX4Q33E94 735 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 MORN1Q5T089 497 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 MBOAT1Q6ZNC8 495 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 PAGE2Q7Z2X7 111 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 P2RY8Q86VZ1 359 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 ADHFE1Q8IWW8 467 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 RGL4Q8IZJ4 473 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 SCAIQ8N9R8 606 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 KCNJ9Q92806 393 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 ADAM2Q99965 735 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 CPPED1Q9BRF8 314 aaPredicted RBP5.3□□□□□ -1.56
LIMA1-212ENST00000552491 SPON2Q9BUD6 331 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 BOCQ9BWV1 1114 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 KLHL25Q9H0H3 589 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 MIR1-1HGQ9H1L0 117 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 RIBC2Q9H4K1 309 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 CLMPQ9H6B4 373 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 SIAEQ9HAT2 523 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 NUDT4Q9NZJ9 180 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 DLGAP4Q9Y2H0 992 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 TMED5Q9Y3A6 229 aa5.3□□□□□ -1.56
LIMA1-212ENST00000552491 A0A0U1RQF3 1178 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 C2orf81A6NN90 581 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 ANKRD66B4E2M5 251 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 E5RI56 91 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 H3BNC9 293 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 M0QZ92 97 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 PER2O15055 1255 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 RETP07949 1114 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 ITGAMP11215 1152 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 SPNP16150 400 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 HOXB6P17509 224 aaKnown RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 JUNDP17535 347 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 TACR1P25103 407 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 AKT1P31749 480 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 SERPINB10P48595 397 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 TTPAP49638 278 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 FCGRTP55899 365 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 TPTEP56180 551 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 MAP2K5Q13163 448 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 DSC3Q14574 896 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 FAM110CQ1W6H9 321 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 USP39Q53GS9 565 aaKnown RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 CCDC92Q53HC0 331 aaPredicted RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 PRSS36Q5K4E3 855 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 CAPN13Q6MZZ7 669 aaPredicted RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 TAS2R42Q7RTR8 314 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 CHCHD4Q8N4Q1 142 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 CLDN19Q8N6F1 224 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 ZNF513Q8N8E2 541 aaPredicted RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 Q8N9G6 341 aaPredicted RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 PHF10Q8WUB8 498 aaKnown RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 STARD8Q92502 1023 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 POP5Q969H6 163 aaKnown RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 FBXO32Q969P5 355 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 MTFMTQ96DP5 389 aaKnown RBP5.29□□□□□ -1.56
LIMA1-212ENST00000552491 LGALS12Q96DT0 336 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 PYURFQ96I23 114 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 PPP3R2Q96LZ3 170 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 OR52E6Q96RD3 313 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 SH3GL1Q99961 368 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 DPY30Q9C005 99 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 AP5M1Q9H0R1 490 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 MAGIXQ9H6Y5 334 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 ACOT13Q9NPJ3 140 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 C1orf109Q9NX04 203 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 IL37Q9NZH6 218 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 RNF181Q9P0P0 153 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 ANKMY1Q9P2S6 941 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 ERVK-11Q9UQG0 969 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 AP3M1Q9Y2T2 418 aa5.29□□□□□ -1.56
LIMA1-212ENST00000552491 DHRS7Q9Y394 339 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms