RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 ICKQ9UPZ9 632 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 PCDHGA7Q9Y5G6 932 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 PSAT1Q9Y617 370 aa10.29□□□□□ -0.76
PTCH1-225ENST00000551845 ARHGEF17Q96PE2 2063 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-225ENST00000551845 TP53BP1Q12888 1972 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 FAM95CA0A1B0GW59 222 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 TLCD2A6NGC4 264 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 GFYI3L273 518 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 BTN3A1O00481 513 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 RASGRF2O14827 1237 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 POLR1CO15160 346 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 SLC16A5O15375 505 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 PIAS1O75925 651 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 ZBTB11O95625 1053 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 CHRM5P08912 532 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 HIST1H2AGP0C0S8 130 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 NELFEP18615 380 aaKnown RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 HIST1H2ADP20671 130 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 FDXRP22570 491 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 SLC5A2P31639 672 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 KPNA2P52292 529 aaKnown RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 RAB15P59190 212 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 CXADRP78310 365 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 HSD11B2P80365 405 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 TIAL1Q01085 375 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 POU4F1Q01851 419 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 FOXM1Q08050 763 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 NAB1Q13506 487 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 GRB7Q14451 532 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 KIR2DS3Q14952 304 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 TEX35Q5T0J7 233 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 BPHLQ86WA6 291 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 NKAPQ8N5F7 415 aaKnown RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 EIF1ADQ8N9N8 165 aaKnown RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 OR9A1PQ8NGU1 263 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 OR2L8Q8NGY9 312 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 TSPAN17Q96FV3 270 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 HIST1H2AHQ96KK5 128 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 NRTNQ99748 197 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 HIST1H2AJQ99878 128 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 ZPBPQ9BS86 351 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 H2AFJQ9BTM1 129 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 TRIM54Q9BYV2 358 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 CLMPQ9H6B4 373 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 NINJ2Q9NZG7 142 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 POMT2Q9UKY4 750 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 RUVBL2Q9Y230 463 aaKnown RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 MTO1Q9Y2Z2 717 aaKnown RBP10.28□□□□□ -0.76
PTCH1-225ENST00000551845 PCDHB11Q9Y5F2 797 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 PCDHGA3Q9Y5H0 932 aa10.28□□□□□ -0.76
PTCH1-225ENST00000551845 IGHV5-51A0A0C4DH38 117 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 PMS2P1A4D2B8 440 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 SLC9B1P1A6NJY1 282 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 ZNF839A8K0R7 811 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CDRT15L2A8MXV6 281 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 SYF2O95926 243 aaKnown RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 C8GP07360 202 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CYP2A7P20853 494 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 ECHS1P30084 290 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 PKLRP30613 574 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 ETV5P41161 510 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 BDKRB1P46663 353 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 TAS2R39P59534 338 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 PPP1CAP62136 330 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 ACY1Q03154 408 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 KCNC4Q03721 635 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 IL11RAQ14626 422 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 USP10Q14694 798 aaKnown RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 ARHGAP19Q14CB8 494 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 SF1Q15637 639 aaKnown RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CCSMST1Q4G0I0 132 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 ANKS6Q68DC2 871 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 SPESP1Q6UW49 350 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CEACAM20Q6UY09 585 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 UBE2R2Q712K3 238 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 PIWIL4Q7Z3Z4 852 aaKnown RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CLEC14AQ86T13 490 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 C2orf73Q8N5S3 287 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 FBXO15Q8NCQ5 510 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 LINGO1Q96FE5 620 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 PDLIM5Q96HC4 596 aaKnown RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 SLC41A2Q96JW4 573 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 IL17FQ96PD4 163 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 TEFMQ96QE5 360 aaKnown RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 OR2A14Q96R47 310 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 PKP4Q99569 1192 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 RBBP8Q99708 897 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 OLFM1Q99784 485 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 MCMBPQ9BTE3 642 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 DDA1Q9BW61 102 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 SLC12A9Q9BXP2 914 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CDC42EP4Q9H3Q1 356 aaKnown RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 PARVBQ9HBI1 364 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 GPAMQ9HCL2 828 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 PDE7BQ9NP56 450 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 ASCL3Q9NQ33 180 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 SPATA7Q9P0W8 599 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CIDEBQ9UHD4 219 aa10.27□□□□□ -0.77
PTCH1-225ENST00000551845 CELSR3Q9NYQ7 3312 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms