RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TEX22C9J3V5 150 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 MCIDASD6RGH6 385 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 H0YCG3 227 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 K7ENM7 598 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 K7ENP7 123 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 PLK4O00444 970 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 MDM4O15151 490 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 MATN3O15232 486 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 BCAT2O15382 392 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 FLRT2O43155 660 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 FZD7O75084 574 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF217O75362 1048 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 TIPRLO75663 272 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 TACC2O95359 2948 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 F9P00740 461 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 RFPL3SP0C7P2 107 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 UBL4AP11441 157 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 HOXB2P14652 356 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 ANK1P16157 1881 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 ACP1P24666 158 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 YWHAQP27348 245 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CASP1P29466 404 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 GJC1P36383 396 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 LONP1P36776 959 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 GNL1P36915 607 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 STAT1P42224 750 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 DPP6P42658 865 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 IFNAR2P48551 515 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 POLD2P49005 469 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 LIG4P49917 911 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CCR9P51686 369 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 GALCP54803 685 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 RPS14P62263 151 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 HMGN5P82970 282 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 TFAMQ00059 246 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 B4GALNT1Q00973 533 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 KDSRQ06136 332 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 GFPT1Q06210 699 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 BFSP1Q12934 665 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 DNAJC3Q13217 504 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 MTA1Q13330 715 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CKAP5Q14008 2032 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 IL13RA2Q14627 380 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 VEPH1Q14D04 833 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 SLC39A14Q15043 492 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 TSTQ16762 297 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 AP5B1Q2VPB7 878 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 C5orf22Q49AR2 442 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 FSCBQ5H9T9 825 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 MDH1BQ5I0G3 518 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 EOGTQ5NDL2 527 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 SH2D4BQ5SQS7 431 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 C10orf76Q5T2E6 689 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 MPP7Q5T2T1 576 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 OTUD1Q5VV17 481 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 KCTD16Q68DU8 428 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 IGFL4Q6B9Z1 124 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 ITPRIPL1Q6GPH6 555 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CFAP161Q6P656 301 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 INO80CQ6PI98 192 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 SLC30A9Q6PML9 568 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CPLX2Q6PUV4 134 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CRIP3Q6Q6R5 217 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 SHC4Q6S5L8 630 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 SLC36A4Q6YBV0 504 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC186Q7Z3E2 898 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 AMIGO2Q86SJ2 522 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 MRGPRGQ86SM5 289 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 KLBQ86Z14 1044 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 WDR49Q8IV35 697 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 NUP93Q8N1F7 819 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 GHDCQ8N2G8 530 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 PNLDC1Q8NA58 520 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 KDM1BQ8NB78 822 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 LINC00301Q8NCQ3 95 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 KIAA0895Q8NCT3 520 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 NFKBIDQ8NI38 313 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC26Q8TAB7 109 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 ADAMTS15Q8TE58 950 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 NDRG1Q92597 394 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CNOT9Q92600 299 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 REPS1Q96D71 796 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 PRICKLE1Q96MT3 831 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 KLF6Q99612 283 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 PRMT1Q99873 361 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 NUSAP1Q9BXS6 441 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 RSPH9Q9H1X1 276 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 GAREM1Q9H706 876 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 ERVMER34-1Q9H9K5 563 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 TLR8Q9NR97 1041 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 STARD5Q9NSY2 213 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 ELOVL2Q9NXB9 296 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 RBAKQ9NYW8 714 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 PLK2Q9NYY3 685 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 CLIC5Q9NZA1 410 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 IL1RAPL1Q9NZN1 696 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 DEC1Q9P2X7 70 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 SARDHQ9UL12 918 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 NAP1L2Q9ULW6 460 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 NEU3Q9UQ49 428 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms