RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 COPS7BQ9H9Q2 264 aaPredicted RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 C1orf109Q9NX04 203 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 CLEC1BQ9P126 229 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 ZNHIT2Q9UHR6 403 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 SNX6Q9UNH7 406 aa11.2□□□□□ -0.62
RAB5C-208ENST00000551338 EIF3LQ9Y262 564 aaKnown RBP11.2□□□□□ -0.62
RAB5C-208ENST00000551338 C15orf38-AP3S2A0A0A6YYH1 394 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 H3BM21 787 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 IFRD1O00458 451 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-208ENST00000551338 MID1O15344 667 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 SEC22BO75396 215 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 C1orf105O95561 183 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 CAPNS1P04632 268 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 MAP4P27816 1152 aaKnown RBP11.19□□□□□ -0.62
RAB5C-208ENST00000551338 HALP42357 657 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 MAPK9P45984 424 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 SOX9P48436 509 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 DGKQP52824 942 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 AQP4P55087 323 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 TAS2R38P59533 333 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 CAMK2GQ13555 558 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-208ENST00000551338 PTGR1Q14914 329 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 NUMA1Q14980 2115 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 LRRC36Q1X8D7 754 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 ITPRIPL2Q3MIP1 535 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 AGBL4Q5VU57 503 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 IRAK1BP1Q5VVH5 260 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 FAM46CQ5VWP2 391 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 IRGCQ6NXR0 463 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 DLEU7Q6UYE1 221 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 CYP2R1Q6VVX0 501 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 ARPINQ7Z6K5 226 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 DHFR2Q86XF0 187 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 TICAM1Q8IUC6 712 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 TRAPPC5Q8IUR0 188 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 TMEM126BQ8IUX1 230 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 ZNF547Q8IVP9 402 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 AADATQ8N5Z0 425 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 PLA2G15Q8NCC3 412 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 OR56A3Q8NH54 315 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 DNAJB14Q8TBM8 379 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 HM13Q8TCT9 377 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 EZH1Q92800 747 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-208ENST00000551338 N4BP2L2Q92802 583 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-208ENST00000551338 SLCO4A1Q96BD0 722 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 COX14Q96I36 57 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 FCRL1Q96LA6 429 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 MAGEB10Q96LZ2 347 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-208ENST00000551338 GDF15Q99988 308 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 DPY30Q9C005 99 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 RSPH9Q9H1X1 276 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-208ENST00000551338 VCX3BQ9H321 246 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 MUC13Q9H3R2 512 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 TRIM39Q9HCM9 518 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 SLAMF8Q9P0V8 285 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 EPS15L1Q9UBC2 864 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 CIDEBQ9UHD4 219 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 DLGAP4Q9Y2H0 992 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 DTNAQ9Y4J8 743 aa11.19□□□□□ -0.62
RAB5C-208ENST00000551338 PCYT1BQ9Y5K3 369 aaPredicted RBP11.19□□□□□ -0.62
RAB5C-208ENST00000551338 ZNF839A8K0R7 811 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 E7EQ34 232 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 AP1G1O43747 822 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 VEGFDO43915 354 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 UGDHO60701 494 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 NPPAP01160 153 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 BCKDHAP12694 445 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 ZNF8P17098 575 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-208ENST00000551338 SLC7A1P30825 629 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 NEK2P51955 445 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CLNS1AP54105 237 aaKnown RBP11.18□□□□□ -0.62
RAB5C-208ENST00000551338 RPS14P62263 151 aaKnown RBP11.18□□□□□ -0.62
RAB5C-208ENST00000551338 LIPEQ05469 1076 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 DLX2Q07687 328 aaPredicted RBP11.18□□□□□ -0.62
RAB5C-208ENST00000551338 PCDH1Q08174 1060 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 NAE1Q13564 534 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 PWP1Q13610 501 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 SELPLGQ14242 412 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CST6Q15828 149 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 GRAMD1BQ3KR37 738 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 ATAT1Q5SQI0 421 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CACHD1Q5VU97 1274 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 LIPJQ5W064 366 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 FRG2Q64ET8 278 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 GRHL2Q6ISB3 625 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 NANOGP8Q6NSW7 305 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CRTC3Q6UUV7 619 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 ADAMTSL4Q6UY14 1074 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 PRR23BQ6ZRT6 265 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 C11orf96Q7Z7L8 435 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CACUL1Q86Y37 369 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 PTRH1Q86Y79 214 aaKnown RBP11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CFAP206Q8IYR0 622 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 RNF175Q8N4F7 328 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 OR2T34Q8NGX1 318 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 OR2T3Q8NH03 318 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 CLHC1Q8NHS4 586 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 WDR20Q8TBZ3 569 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 FAM110BQ8TC76 370 aa11.18□□□□□ -0.62
RAB5C-208ENST00000551338 ATL1Q8WXF7 558 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms