RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	FAM159B	A6NKW6	160 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	CYSRT1	A8MQ03	144 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283		H3BMM5	538 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	RASGRF2	O14827	1237 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	EIF3H	O15372	352 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	KLK10	O43240	276 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	ZW10	O43264	779 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	RRP9	O43818	475 aa	Known RBP	10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	WISP3	O95389	354 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	CTAGE8	P0CG41	777 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	CD9	P21926	228 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	ATP5D	P30049	168 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	SHMT2	P34897	504 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	PLOD1	Q02809	727 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	FOXM1	Q08050	763 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	NAA30	Q147X3	362 aa	Predicted RBP	10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	PHKG1	Q16816	387 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	PWWP2B	Q6NUJ5	590 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	ZNF449	Q6P9G9	518 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	SPESP1	Q6UW49	350 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	CDHR3	Q6ZTQ4	885 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	KIAA0408	Q6ZU52	694 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	CTAGE6	Q86UF2	777 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	CTAGE4	Q8IX94	777 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	LMNTD2	Q8IXW0	634 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	GSPT2	Q8IYD1	628 aa	Known RBP	10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	LSMEM2	Q8N112	164 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	D2HGDH	Q8N465	521 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	EFCAB3	Q8N7B9	438 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	CEP112	Q8N8E3	955 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	GPATCH11	Q8N954	259 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	SLC38A9	Q8NBW4	561 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	ASB11	Q8WXH4	323 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	INPP5D	Q92835	1189 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	RUFY1	Q96T51	708 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	TSSK1B	Q9BXA7	367 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	UNK	Q9C0B0	810 aa	Known RBP	10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	FBXO8	Q9NRD0	319 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	NINJ2	Q9NZG7	142 aa		10.83	□□□□□ -0.68
RAB5B-208	ENST00000550283	HMX2	A2RU54	273 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283		H3BMH7	237 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	GFY	I3L273	518 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	MYO1C	O00159	1063 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	TOX3	O15405	576 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	DLGAP3	O95886	979 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	FAM153B	P0C7A2	387 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	RHOXF2B	P0C7M4	288 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	MYBL2	P10244	700 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	ERG	P11308	486 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	SAT1	P21673	171 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	CDH3	P22223	829 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	F8A1	P23610	371 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	RAB28	P51157	221 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	SNRPN	P63162	240 aa	Known RBP	10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	KBTBD12	Q3ZCT8	623 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	FAM153C	Q494X1	144 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	KIAA1614	Q5VZ46	1190 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	FCRL6	Q6DN72	434 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	LCN10	Q6JVE6	187 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	SUSD1	Q6UWL2	747 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	C3orf62	Q6ZUJ4	267 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	GALNT7	Q86SF2	657 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	PALM2	Q8IXS6	379 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	LRRC56	Q8IYG6	542 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	SPATA6L	Q8N4H0	392 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	ZNF248	Q8NDW4	579 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	OR2L8	Q8NGY9	312 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	OR1L3	Q8NH93	324 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	FBF1	Q8TES7	1133 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	KCNE4	Q8WWG9	221 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	IFT81	Q8WYA0	676 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	NKD1	Q969G9	470 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	ZNF501	Q96CX3	271 aa	Predicted RBP	10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	LINGO1	Q96FE5	620 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	FCRL4	Q96PJ5	515 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	RHOXF2	Q9BQY4	288 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	DDA1	Q9BW61	102 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	ZFAT	Q9P243	1243 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	POLG2	Q9UHN1	485 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	PILRA	Q9UKJ1	303 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	SH2B3	Q9UQQ2	575 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	BTRC	Q9Y297	605 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	VPS9D1	Q9Y2B5	631 aa		10.82	□□□□□ -0.68
RAB5B-208	ENST00000550283	PTPRQ	Q9UMZ3	2332 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	IGKV1-8	A0A0C4DH67	115 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	LOC101059948	A0A1B0GTJ6	334 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	FAM95C	A0A1B0GW59	222 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	C2orf74	A8MZ97	194 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	ISM1	B1AKI9	464 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	KPNA5	O15131	536 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	POLR1C	O15160	346 aa	Predicted RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	PHGDH	O43175	533 aa	Known RBP	10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	VPS26A	O75436	327 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	SPAG6	O75602	509 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	STK17B	O94768	372 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	KIAA0754	O94854	1291 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	SLC16A8	O95907	504 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	MPC1L	P0DKB6	136 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	FGF5	P12034	268 aa		10.81	□□□□□ -0.68
RAB5B-208	ENST00000550283	MAG	P20916	626 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms