RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 HEPHQ9BQS7 1158 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 XRN2Q9H0D6 950 aaKnown RBP eCLIP10□□□□□ -0.819e-6■■■■■ 32.4
SMARCC2-209ENST00000550164 MOV10Q9HCE1 1003 aaKnown RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 C11orf16Q9NQ32 467 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 GKN1Q9NS71 199 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 MATN4O95460 622 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 SNAI1O95863 264 aaPredicted RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 FPR1P21462 350 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 PAICSP22234 425 aaKnown RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 SMARCB1Q12824 385 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 APOFQ13790 326 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 ZSWIM7Q19AV6 140 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 LYPLAL1Q5VWZ2 237 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 KANK2Q63ZY3 851 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 THOC7Q6I9Y2 204 aaKnown RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 TMPRSS11BQ86T26 416 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 ZFAND4Q86XD8 727 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 ZNF614Q8N883 585 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 OR10G2Q8NGC3 310 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 C1QTNF1Q9BXJ1 281 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 THUMPD1Q9NXG2 353 aaKnown RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 AASSQ9UDR5 926 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 RNF6Q9Y252 685 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 PCDHGA8Q9Y5G5 932 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 TNRC6CQ9HCJ0 1690 aaKnown RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 OR6C75A6NL08 312 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 OR2AG2A6NM03 316 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 A8MV72 311 aaPredicted RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 PTGESO14684 152 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 PSIP1O75475 530 aaKnown RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 CCNDBP1O95273 360 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 CD1EP15812 388 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 MATN1P21941 496 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 SPAM1P38567 509 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 SLC15A1P46059 708 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 ALDH3B2P48448 385 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 FCGRTP55899 365 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 SCN1BQ07699 218 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 ABHD18Q0P651 414 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 SERINC3Q13530 473 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 GANABQ14697 944 aaKnown RBP10□□□□□ -0.81
SMARCC2-209ENST00000550164 ABRAXAS2Q15018 415 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 FAM110CQ1W6H9 321 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 KCTD11Q693B1 232 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 HMBOX1Q6NT76 420 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 CYP2U1Q7Z449 544 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 DEFB128Q7Z7B8 93 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 IGSF8Q969P0 613 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 R3HDMLQ9H3Y0 253 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 EHD1Q9H4M9 534 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 CD84Q9UIB8 345 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 ZNF451Q9Y4E5 1061 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 PCDHGB3Q9Y5G1 929 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 MYO10Q9HD67 2058 aa10□□□□□ -0.81
SMARCC2-209ENST00000550164 PRR23AA6NEV1 266 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 KPNA3O00505 521 aaPredicted RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 CASKO14936 926 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 SGTAO43765 313 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 FEN1P39748 380 aaKnown RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 GTDC1Q4AE62 458 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 LRRC73Q5JTD7 316 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 CDH24Q86UP0 819 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 SPARTQ8N0X7 666 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 HJURPQ8NCD3 748 aaPredicted RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 HSH2DQ96JZ2 352 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 C8orf48Q96LL4 319 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 GFM1Q96RP9 751 aaKnown RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 OSGEPL1Q9H4B0 414 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 SP140LQ9H930 580 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 STARD7Q9NQZ5 370 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 TMED5Q9Y3A6 229 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 FADS2P1A8MWK0 482 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 F2P00734 622 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 URODP06132 367 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 FAM163BP0C2L3 166 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 PAX3P23760 479 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 ANXA11P50995 505 aaKnown RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 POLR2LP62875 67 aaKnown RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 C18orf21Q32NC0 220 aaPredicted RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 PIK3R6Q5UE93 754 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 KIAA1614Q5VZ46 1190 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 PSAPL1Q6NUJ1 521 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 ZNF598Q86UK7 904 aaKnown RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 ANKRD13BQ86YJ7 626 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 RGL4Q8IZJ4 473 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 UMODL1-AS1Q8N2C9 162 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 ZMIZ2Q8NF64 920 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 OR8J3Q8NGG0 315 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 DUSP26Q9BV47 211 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 MALT1Q9UDY8 824 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 FZD9O00144 591 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 MANBAO00462 879 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 ONECUT3O60422 494 aaPredicted RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 GPR32O75388 356 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 NR2F1P10589 423 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 TIE1P35590 1138 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 MAPK8P45983 427 aa9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 ARCN1P48444 511 aaKnown RBP9.99□□□□□ -0.81
SMARCC2-209ENST00000550164 CCT3P49368 545 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms