RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	DEFB133	Q30KQ1	61 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	PTCHD3	Q3KNS1	767 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	FRMD7	Q6ZUT3	714 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	NAGS	Q8N159	534 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	AFAP1L2	Q8N4X5	818 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	SLC37A2	Q8TED4	501 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	LCN9	Q8WX39	176 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	SMPDL3A	Q92484	453 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	CHMP6	Q96FZ7	201 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	MED8	Q96G25	268 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	C7orf26	Q96N11	449 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	TMEM79	Q9BSE2	394 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	DUSP23	Q9BVJ7	150 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	DRC3	Q9H069	523 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	SLC32A1	Q9H598	525 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	DNAJC11	Q9NVH1	559 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	PCTP	Q9UKL6	214 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	PCDHGA10	Q9Y5H3	936 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	TRBV23OR9-2	A0A075B6M9	112 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	FAM221B	A6H8Z2	402 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	SRRM3	A6NNA2	597 aa	Predicted RBP	11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	PATE3	B3GLJ2	98 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	E2F3	O00716	465 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	TAPBP	O15533	448 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	EML2	O95834	649 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	OTC	P00480	354 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	EPB42	P16452	691 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	PKLR	P30613	574 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	UBE2I	P63279	158 aa	Known RBP	11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	CLC	Q05315	142 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	GALNT1	Q10472	559 aa	Predicted RBP	11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	LCP2	Q13094	533 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	PRKAA1	Q13131	559 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	GTF2H2	Q13888	395 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	RBBP7	Q16576	425 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	CYP2A13	Q16696	494 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	INAVA	Q3KP66	663 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	CCSMST1	Q4G0I0	132 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	C14orf28	Q4W4Y0	310 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	UNC50	Q53HI1	259 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	C6orf132	Q5T0Z8	1188 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	THEMIS2	Q5TEJ8	643 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	GTF2H2C	Q6P1K8	395 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	CRLF3	Q8IUI8	442 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	KLHDC8A	Q8IYD2	350 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	TEX9	Q8N6V9	391 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	ARL10	Q8N8L6	244 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	SNX31	Q8N9S9	440 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR52E1	Q8NGJ3	308 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR6Y1	Q8NGX8	325 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR2L8	Q8NGY9	312 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR56A3	Q8NH54	315 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZNF483	Q8TF39	744 aa	Predicted RBP	11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZNF480	Q8WV37	535 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	ATP6V1E2	Q96A05	226 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	MIPEP	Q99797	713 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	HAUS8	Q9BT25	410 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	GTPBP2	Q9BX10	602 aa	Known RBP	11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	PCBD2	Q9H0N5	130 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	ATG10	Q9H0Y0	220 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	KCNH6	Q9H252	994 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	SRMS	Q9H3Y6	488 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	SLC40A1	Q9NP59	571 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	EVA1B	Q9NVM1	165 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	UCKL1	Q9NWZ5	548 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	NLGN3	Q9NZ94	848 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	OR6C2	Q9NZP2	312 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	CIDEB	Q9UHD4	219 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	PLAGL1	Q9UM63	463 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	KCNE2	Q9Y6J6	123 aa		11.27	□□□□□ -0.61
CNOT2-223	ENST00000550160	SDK1	Q7Z5N4	2213 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	GMNC	A6NCL1	334 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	LRRC14B	A6NHZ5	514 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	CLGN	O14967	610 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZW10	O43264	779 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	SHOX2	O60902	331 aa	Predicted RBP	11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	SNN	O75324	88 aa	Predicted RBP	11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	CRCP	O75575	148 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	TROVE2	P10155	538 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	ERG	P11308	486 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	FASLG	P48023	281 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	SLC6A12	P48065	614 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	HK2	P52789	917 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	PKNOX1	P55347	436 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	TBPL1	P62380	186 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	BNIP3	Q12983	259 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	GRB7	Q14451	532 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	SUZ12	Q15022	739 aa	Known RBP	11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	C18orf21	Q32NC0	220 aa	Predicted RBP	11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	FBXO48	Q5FWF7	155 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	ARL13A	Q5H913	290 aa	Predicted RBP	11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	PRAMEF13	Q5VWM6	474 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	KLHL35	Q6PF15	583 aa		11.26	□□□□□ -0.61
CNOT2-223	ENST00000550160	OGFOD3	Q6PK18	319 aa		11.26	□□□□□ -0.61

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