RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CCDC38Q502W7 563 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 TTLL10Q6ZVT0 673 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 C2orf73Q8N5S3 287 aaPredicted RBP14.81□□□□□ -0.04
RAB5C-205ENST00000550013 WDR77Q9BQA1 342 aaPredicted RBP14.81□□□□□ -0.04
RAB5C-205ENST00000550013 LRRC40Q9H9A6 602 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 NOVA2Q9UNW9 492 aaKnown RBP14.81□□□□□ -0.04
RAB5C-205ENST00000550013 TEP1Q99973 2627 aaKnown RBP14.8□□□□□ -0.04
RAB5C-205ENST00000550013 MROH6A6NGR9 719 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 ENO4A6NNW6 628 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 QSOX1O00391 747 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 SOCS6O14544 535 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 MMP11P24347 488 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 GDF10P55107 478 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 PRAMEF13Q5VWM6 474 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 SHISA6Q6ZSJ9 500 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 COX15Q7KZN9 410 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 TAX1BP1Q86VP1 789 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 VRK3Q8IV63 474 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 MCATQ8IVS2 390 aaKnown RBP14.8□□□□□ -0.04
RAB5C-205ENST00000550013 CCDC170Q8IYT3 715 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 LINC01555Q8NAE3 123 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 TTC13Q8NBP0 860 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 ST6GALNAC3Q8NDV1 305 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.8□□□□□ -0.04
RAB5C-205ENST00000550013 ALS2CR12Q96Q35 445 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 TSPY26PQ9H489 355 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 CDC23Q9UJX2 597 aa14.8□□□□□ -0.04
RAB5C-205ENST00000550013 A0A1B0GX78 115 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 E2F3O00716 465 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 OR56A5P0C7T3 313 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 MCM3P25205 808 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 RAB28P51157 221 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 NAP1L1P55209 391 aaKnown RBP14.79□□□□□ -0.04
RAB5C-205ENST00000550013 OVCH1Q7RTY7 1134 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 KCNMB4Q86W47 210 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 DTWD1Q8N5C7 304 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 LKAAEAR1Q8TD35 194 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 DLG3Q92796 817 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 FKBP10Q96AY3 582 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 IL17FQ96PD4 163 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 SPSB2Q99619 263 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 MENTQ9BUN1 341 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 AGPAT4Q9NRZ5 378 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 SLC2A6Q9UGQ3 507 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 R3HDM2Q9Y2K5 976 aaKnown RBP14.79□□□□□ -0.04
RAB5C-205ENST00000550013 HS3ST3B1Q9Y662 390 aa14.79□□□□□ -0.04
RAB5C-205ENST00000550013 CCR7P32248 378 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 CYLC1P35663 651 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-205ENST00000550013 CETN2P41208 172 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 GRIA3P42263 894 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 PLOD1Q02809 727 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-205ENST00000550013 GRB7Q14451 532 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 NKG7Q16617 165 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 DNAJC21Q5F1R6 531 aaKnown RBP14.78□□□□□ -0.04
RAB5C-205ENST00000550013 C1QL3Q5VWW1 255 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 FCRL6Q6DN72 434 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 KIRREL2Q6UWL6 708 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 PARP9Q8IXQ6 854 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 SLC22A15Q8IZD6 547 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 METTL27Q8N6F8 245 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-205ENST00000550013 OR52K1Q8NGK4 314 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 OR13J1Q8NGT2 312 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 CFAP61Q8NHU2 1237 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 GRHL3Q8TE85 626 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 PPP4R1Q8TF05 950 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 HDAC10Q969S8 669 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 MESP1Q9BRJ9 268 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 SOX17Q9H6I2 414 aaPredicted RBP14.78□□□□□ -0.04
RAB5C-205ENST00000550013 WDR54Q9H977 334 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 LUC7LQ9NQ29 371 aaKnown RBP14.78□□□□□ -0.04
RAB5C-205ENST00000550013 CUTCQ9NTM9 273 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 CTSFQ9UBX1 484 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 OSGIN2Q9Y236 505 aa14.78□□□□□ -0.04
RAB5C-205ENST00000550013 REXO2Q9Y3B8 237 aaKnown RBP14.78□□□□□ -0.04
RAB5C-205ENST00000550013 APCP25054 2843 aa14.77□□□□□ -0.04
RAB5C-205ENST00000550013 GRID2IPA4D2P6 1211 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 SOWAHDA6NJG2 315 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 DSCR3O14972 297 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 LRRTM2O43300 516 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 KDM1AO60341 852 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 ZNF189O75820 626 aaPredicted RBP14.77□□□□□ -0.05
RAB5C-205ENST00000550013 ONECUT2O95948 504 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 GOT2P00505 430 aaKnown RBP14.77□□□□□ -0.05
RAB5C-205ENST00000550013 OR1D4P47884 311 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 ARSFP54793 590 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 HSPA14Q0VDF9 509 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 SEMA3AQ14563 771 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 P3H1Q32P28 736 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 AGAP7PQ5VUJ5 663 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 FIGLAQ6QHK4 219 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 IGFL2Q6UWQ7 119 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 TICAM1Q8IUC6 712 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 LRRC57Q8N9N7 239 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 DNAJB14Q8TBM8 379 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 NACC2Q96BF6 587 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 CNDP1Q96KN2 507 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 AGAP4Q96P64 663 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 TMEM121Q9BTD3 319 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 LACRTQ9GZZ8 138 aa14.77□□□□□ -0.05
RAB5C-205ENST00000550013 SLC26A1Q9H2B4 701 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms