RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 HMGCLP35914 325 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 TM4SF4P48230 202 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 NRIP1P48552 1158 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 IRF5Q13568 498 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 ABRAXAS2Q15018 415 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 NANOGP8Q6NSW7 305 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 GPR153Q6NV75 609 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 BRAT1Q6PJG6 821 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 AHSA2Q719I0 299 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 THAP5Q7Z6K1 395 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 HIPK1Q86Z02 1210 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 KIAA2013Q8IYS2 634 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 PIK3C3Q8NEB9 887 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 NANOGQ9H9S0 305 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 LIN28AQ9H9Z2 209 aaKnown RBP14.65□□□□□ -0.06
CUX1-214ENST00000550008 DAPK2Q9UIK4 370 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 AHCYL1O43865 530 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 ASLP04424 464 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 MAGP20916 626 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 CLCNKAP51800 687 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 PDSS2Q86YH6 399 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 NUS1Q96E22 293 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 FBXL20Q96IG2 436 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 MAGEE1Q9HCI5 957 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 KLHL3Q9UH77 587 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 RUVBL1Q9Y265 456 aaKnown RBP14.65□□□□□ -0.06
CUX1-214ENST00000550008 LIN7AO14910 233 aaPredicted RBP14.65□□□□□ -0.06
CUX1-214ENST00000550008 CHRM5P08912 532 aaPredicted RBP14.65□□□□□ -0.06
CUX1-214ENST00000550008 GDI1P31150 447 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 MERTKQ12866 999 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 C1DQ13901 141 aaKnown RBP14.65□□□□□ -0.06
CUX1-214ENST00000550008 DSC3Q14574 896 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 NCF4Q15080 339 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 NADK2Q4G0N4 442 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 DGKKQ5KSL6 1271 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 FAM43BQ6ZT52 329 aaPredicted RBP14.65□□□□□ -0.06
CUX1-214ENST00000550008 SLC15A3Q8IY34 581 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 CPA6Q8N4T0 437 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 OR4K1Q8NGD4 311 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 ZCCHC10Q8TBK6 192 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 BIRC7Q96CA5 298 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 CXorf21Q9HAI6 301 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 SEC14L3Q9UDX4 400 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 GTF2A1LQ9UNN4 478 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 SCN1AP35498 2009 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 FGF19O95750 216 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 ANGPTL1O95841 491 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 KLKB1P03952 638 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 HOXD8P13378 290 aaPredicted RBP14.64□□□□□ -0.07
CUX1-214ENST00000550008 CTSKP43235 329 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 ASMTP46597 345 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 SFSWAPQ12872 951 aaKnown RBP14.64□□□□□ -0.07
CUX1-214ENST00000550008 KCTD11Q693B1 232 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 PGBD5Q8N414 524 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 TMBIM1Q969X1 311 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 MGME1Q9BQP7 344 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 YIPF4Q9BSR8 244 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 CD244Q9BZW8 370 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 FANCEQ9HB96 536 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 TREX1Q9NSU2 369 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 KCNK6Q9Y257 313 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 BACE2Q9Y5Z0 518 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 AQP12BA6NM10 295 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 OR6B1O95007 311 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 IMPDH2P12268 514 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 ENGP17813 658 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 MAGEA3P43357 314 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 PCBP2Q15366 365 aaKnown RBP eCLIP14.64□□□□□ -0.072e-6■■■■■ 33.7
CUX1-214ENST00000550008 MED22Q15528 200 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 BEND5Q7L4P6 421 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 THOC6Q86W42 341 aaKnown RBP14.64□□□□□ -0.07
CUX1-214ENST00000550008 AQP12AQ8IXF9 295 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 TRPV3Q8NET8 790 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 BTN2A2Q8WVV5 523 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 C3orf30Q96M34 536 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 KLHL25Q9H0H3 589 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 IL26Q9NPH9 171 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 SPHK2Q9NRA0 654 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 ITM2BQ9Y287 266 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 H6PDO95479 791 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 KLK1P06870 262 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 ALOX12P18054 663 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 IDSP22304 550 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 VIPR1P32241 457 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 DSC1Q08554 894 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 SEMA3BQ13214 749 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 GALNT13Q8IUC8 556 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 ARMC8Q8IUR7 673 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 RELTQ969Z4 430 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 RAD21L1Q9H4I0 556 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 EPS8L2Q9H6S3 715 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 TOR4AQ9NXH8 423 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 I6L893 689 aaPredicted RBP14.64□□□□□ -0.07
CUX1-214ENST00000550008 STX16O14662 325 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 CAPN15O75808 1086 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 SCELO95171 688 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 RAP2AP10114 183 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 CCNA2P20248 432 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 GALK1P51570 392 aa14.64□□□□□ -0.07
CUX1-214ENST00000550008 SGSHP51688 502 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms