RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 CCDC138Q96M89 665 aa25.52■■□□□ 1.68
CHPT1-204ENST00000549128 HIST1H2AJQ99878 128 aa25.52■■□□□ 1.68
CHPT1-204ENST00000549128 H2AFJQ9BTM1 129 aa25.52■■□□□ 1.68
CHPT1-204ENST00000549128 CENPHQ9H3R5 247 aa25.52■■□□□ 1.68
CHPT1-204ENST00000549128 OR6C2Q9NZP2 312 aa25.52■■□□□ 1.68
CHPT1-204ENST00000549128 STOX2Q9P2F5 926 aaPredicted RBP25.52■■□□□ 1.68
CHPT1-204ENST00000549128 APOBEC2Q9Y235 224 aaKnown RBP25.52■■□□□ 1.68
CHPT1-204ENST00000549128 NCF1BA6NI72 391 aaPredicted RBP25.51■■□□□ 1.67
CHPT1-204ENST00000549128 NCF1CA8MVU1 366 aaPredicted RBP25.51■■□□□ 1.67
CHPT1-204ENST00000549128 CPNE6O95741 557 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 CHRM5P08912 532 aaPredicted RBP25.51■■□□□ 1.67
CHPT1-204ENST00000549128 NCF1P14598 390 aaPredicted RBP25.51■■□□□ 1.67
CHPT1-204ENST00000549128 CREB1P16220 341 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 CYP2A13Q16696 494 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 TECRLQ5HYJ1 363 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 C16orf46Q6P387 395 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 OOSP2Q86WS3 158 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 GPSM1Q86YR5 675 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 SRRM1Q8IYB3 904 aaKnown RBP25.51■■□□□ 1.67
CHPT1-204ENST00000549128 LRRC56Q8IYG6 542 aaPredicted RBP25.51■■□□□ 1.67
CHPT1-204ENST00000549128 CNPY4Q8N129 248 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 STAG3L4Q8TBR4 150 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 EXT2Q93063 718 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 PPM1MQ96MI6 270 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 GFM1Q96RP9 751 aaKnown RBP25.51■■□□□ 1.67
CHPT1-204ENST00000549128 TRIM54Q9BYV2 358 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 TWSG1Q9GZX9 223 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 EPB41L1Q9H4G0 881 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 TMEM216Q9P0N5 145 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 SPATA7Q9P0W8 599 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 LNPEPQ9UIQ6 1025 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 RNF112Q9ULX5 631 aa25.51■■□□□ 1.67
CHPT1-204ENST00000549128 FAM221BA6H8Z2 402 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 ZW10O43264 779 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 KDM1AO60341 852 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 PNLIPRP1P54315 467 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 AP1S2P56377 157 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 SLC18A2Q05940 514 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 SPIDRQ14159 915 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 PUM1Q14671 1186 aaKnown RBP eCLIP25.5■■□□□ 1.67
CHPT1-204ENST00000549128 C18orf21Q32NC0 220 aaPredicted RBP25.5■■□□□ 1.67
CHPT1-204ENST00000549128 TNFAIP8L3Q5GJ75 292 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 ANKS6Q68DC2 871 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 SUSD1Q6UWL2 747 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 FRA10AC1Q70Z53 315 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 TMEM151AQ8N4L1 468 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 ATG10Q9H0Y0 220 aa25.5■■□□□ 1.67
CHPT1-204ENST00000549128 COL27A1Q8IZC6 1860 aaPredicted RBP25.5■■□□□ 1.67
CHPT1-204ENST00000549128 A0A1W2PPV9 198 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 D6RAR5 112 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 E7ENX8 843 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 CAPN5O15484 640 aaPredicted RBP25.49■■□□□ 1.67
CHPT1-204ENST00000549128 KERAO60938 352 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 TAP2Q03519 686 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 TSNAXIP1Q2TAA8 658 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 IRGCQ6NXR0 463 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 KLC3Q6P597 504 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 KLHL35Q6PF15 583 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 RHEBL1Q8TAI7 183 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 SCYL1Q96KG9 808 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 TGM7Q96PF1 710 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 RAB11FIP5Q9BXF6 653 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 C12orf65Q9H3J6 166 aaKnown RBP25.49■■□□□ 1.67
CHPT1-204ENST00000549128 ZNF446Q9NWS9 450 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 XPR1Q9UBH6 696 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 KLHL3Q9UH77 587 aa25.49■■□□□ 1.67
CHPT1-204ENST00000549128 PIPSLA2A3N6 862 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 GSAPA4D1B5 854 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 UBXN8O00124 270 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 KIF1CO43896 1103 aaKnown RBP25.48■■□□□ 1.67
CHPT1-204ENST00000549128 SASH3O75995 380 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 SBK3P0C264 359 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 MTHFD2P13995 350 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 PDX1P52945 283 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 CDCP2Q5VXM1 449 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 WDR74Q6RFH5 385 aaPredicted RBP25.48■■□□□ 1.67
CHPT1-204ENST00000549128 AGTRAPQ6RW13 159 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 B3GNT8Q7Z7M8 397 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 FAM20CQ8IXL6 584 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 SYTL1Q8IYJ3 562 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 FLVCR1-AS1Q8TAF5 88 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 HMGCLL1Q8TB92 370 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 ZMYND15Q9H091 742 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 SEMA6CQ9H3T2 930 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 ACTR10Q9NZ32 417 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 CPSF2Q9P2I0 782 aaKnown RBP25.48■■□□□ 1.67
CHPT1-204ENST00000549128 EPHA6Q9UF33 1036 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 TK2O00142 265 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 PRICKLE3O43900 615 aaPredicted RBP25.48■■□□□ 1.67
CHPT1-204ENST00000549128 PSMB5P28074 263 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 KPNA2P52292 529 aaKnown RBP25.48■■□□□ 1.67
CHPT1-204ENST00000549128 CDKL1Q00532 357 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 ARHGAP19Q14CB8 494 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 FBXO48Q5FWF7 155 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 TMEM71Q6P5X7 295 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 FAM92BQ6ZTR7 304 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 CROCCP2Q86T23 111 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 FBXL8Q96CD0 374 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 PGM2Q96G03 612 aa25.48■■□□□ 1.67
CHPT1-204ENST00000549128 TSNARE1Q96NA8 513 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms