RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CELF2O95319 508 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 GLUD1P00367 558 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 MT-ND2P03891 347 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 ATF6P18850 670 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC11A2P49281 568 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 TMED10P49755 219 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 ARHGEF7Q14155 803 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 KCNA10Q16322 511 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 ADCK1Q86TW2 530 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 CALHM3Q86XJ0 350 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 HIPK1Q86Z02 1210 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 LINC01599Q8WXQ3 324 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 BHMTQ93088 406 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 ACPTQ9BZG2 426 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 GPRC5BQ9NZH0 403 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 DNMT3LQ9UJW3 386 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 OARD1Q9Y530 152 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 FAM220BPB1ANY3 271 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 NT5C1B-RDH14C9J2C7 533 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 H7C0S8 307 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 IGHA2P01877 340 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 ATP5C1P36542 298 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC35A2P78381 396 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 SEMG2Q02383 582 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 MAD2L1Q13257 205 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 INAVAQ3KP66 663 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 ATG9BQ674R7 924 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 TRIM46Q7Z4K8 759 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 P2RY8Q86VZ1 359 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 RASAL3Q86YV0 1011 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 STK40Q8N2I9 435 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 GLB1L3Q8NCI6 653 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 FBLIM1Q8WUP2 373 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 HPS1Q92902 700 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 YIPF6Q96EC8 236 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 EGLN2Q96KS0 407 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 MAGIXQ9H6Y5 334 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 PARVBQ9HBI1 364 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 LATS2Q9NRM7 1088 aa13.8□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC38A8A6NNN8 435 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 UPK3BL1B0FP48 263 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 UPK3BL2E5RIL1 263 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 GAPDHSO14556 408 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC22A1O15245 554 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 AQP9O43315 295 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 CLDN11O75508 207 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 PDYNP01213 254 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZDHHC11BP0C7U3 371 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 MZF1P28698 734 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 GATMP50440 423 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 CLCA4Q14CN2 919 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 CATSPEREQ5SY80 951 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 SHQ1Q6PI26 577 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 NCEH1Q6PIU2 408 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 DOK6Q6PKX4 331 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 VTCN1Q7Z7D3 282 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZNF540Q8NDQ6 660 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 VMP1Q96GC9 406 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 TM6SF2Q9BZW4 377 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 ASB8Q9H765 288 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 MAGEE1Q9HCI5 957 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 PPT2Q9UMR5 302 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 ILVBLA1L0T0 632 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 K7ERQ8 282 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 ACVR2AP27037 513 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 CORO1AP31146 461 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 GKP32189 559 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 S100A3P33764 101 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 CXorf57Q6NSI4 855 aaKnown RBP13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 OR52E4Q8NGH9 312 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZNF566Q969W8 418 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 BTBD2Q9BX70 525 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 VPS4AQ9UN37 437 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 PCDHB1Q9Y5F3 818 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 PCDHGB1Q9Y5G3 927 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 GMPPBQ9Y5P6 360 aa13.79□□□□□ -0.2
RAPGEF3-218ENST00000548919 KRT87PA6NCN2 255 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 M0QX08 132 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 KDM1AO60341 852 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 NBNO60934 754 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 RECQL5O94762 991 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 ITGAMP11215 1152 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 EPB42P16452 691 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZNF7P17097 686 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 TGM1P22735 817 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 PTPN6P29350 595 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 HMGCLP35914 325 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 GSSP48637 474 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 RGS4P49798 205 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 RPS14P62263 151 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 MRPL58Q14197 206 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 ACOX1Q15067 660 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 RTP2Q5QGT7 225 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 ADGRG2Q8IZP9 1017 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 DYNC2LI1Q8TCX1 351 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 SLC35B4Q969S0 331 aa13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 REXO5Q96IC2 774 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 ZNF300Q96RE9 604 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-218ENST00000548919 DUSP21Q9H596 190 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms