RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 EFSO43281 561 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 SPAG6O75602 509 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 DLGAP3O95886 979 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 CTAGE8P0CG41 777 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 MPC1LP0DKB6 136 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 CBSLP0DN79 551 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 ENO3P13929 434 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 MCM3P25205 808 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 SSTR1P30872 391 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 CBSP35520 551 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 SKIV2L2P42285 1042 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 ATP1A2P50993 1020 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 CXADRP78310 365 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 MANEAQ5SRI9 462 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 UGT3A1Q6NUS8 523 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 CTAGE6Q86UF2 777 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 VASH2Q86V25 355 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 TAX1BP1Q86VP1 789 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 BPHLQ86WA6 291 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 CTAGE4Q8IX94 777 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 CACNA2D3Q8IZS8 1091 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 NLGN4XQ8N0W4 816 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 NLGN4YQ8NFZ3 816 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 DENND1AQ8TEH3 1009 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 SEC14L1Q92503 715 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 ZNF501Q96CX3 271 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 RAB11FIP5Q9BXF6 653 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 PHACTR1Q9C0D0 580 aa18.09■□□□□ 0.49
PRPF40B-206ENST00000547764 A0A0J9YY10 115 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 TEX51A0A1B0GUA7 166 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 KIAA0754O94854 1291 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 TIAF1O95411 115 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 CATP04040 527 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 GUCY2DQ02846 1103 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 ZIC1Q15915 447 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 SLC5A12Q1EHB4 618 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 HECTD2Q5U5R9 776 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 PWWP2BQ6NUJ5 590 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 CCDC81Q6ZN84 652 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 PIWIL4Q7Z3Z4 852 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 CCDC25Q86WR0 208 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 FAM20CQ8IXL6 584 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 RAB42Q8N4Z0 105 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 IL22RA1Q8N6P7 574 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 GPATCH11Q8N954 259 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 C19orf47Q8N9M1 422 aaKnown RBP18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 OR9A1PQ8NGU1 263 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 ASB11Q8WXH4 323 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 SLC22A18Q96BI1 424 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 FAM114A2Q9NRY5 505 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 CORO1CQ9ULV4 474 aaPredicted RBP18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 VWA7Q9Y334 891 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 ITPR1Q14643 2758 aa18.08■□□□□ 0.48
PRPF40B-206ENST00000547764 GFYI3L273 518 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 MYO1CO00159 1063 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 EIF3FO00303 357 aaPredicted RBP18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 MAP3K7O43318 606 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 PIAS1O75925 651 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 MAP4P27816 1152 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 VAC14Q08AM6 782 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 ARHGAP40Q5TG30 622 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 PAQR3Q6TCH7 311 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 CDHR3Q6ZTQ4 885 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 C3orf62Q6ZUJ4 267 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 STRA8Q7Z7C7 330 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 SLC26A11Q86WA9 606 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 HMGCLL1Q8TB92 370 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 EEF1AKMT1Q8WVE0 214 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 FCRL4Q96PJ5 515 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 FAM60AQ9NP50 221 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 SMYD2Q9NRG4 433 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 ZDHHC18Q9NUE0 388 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 SPATA7Q9P0W8 599 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 DMGDHQ9UI17 866 aaKnown RBP18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 LNPEPQ9UIQ6 1025 aa18.07■□□□□ 0.48
PRPF40B-206ENST00000547764 K7ENP7 123 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 PRICKLE3O43900 615 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 SNRNP200O75643 2136 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 MSL3P1P0C860 447 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 FDXRP22570 491 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 MAGEA4P43358 317 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 RGS4P49798 205 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 PGGT1BP53609 377 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 GPX6P59796 221 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 MAP7Q14244 749 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 CYP2A13Q16696 494 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 FAM45BPQ6NSW5 357 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 INO80CQ6PI98 192 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 C6orf15Q6UXA7 325 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 ZC3HC1Q86WB0 502 aaKnown RBP18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 ESX1Q8N693 406 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 GALNT6Q8NCL4 622 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 FBXO15Q8NCQ5 510 aaPredicted RBP18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 OR8K5Q8NH50 307 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 FAM45AQ8TCE6 357 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 TCTN2Q96GX1 697 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 PKP4Q99569 1192 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 OLFM1Q99784 485 aa18.06■□□□□ 0.48
PRPF40B-206ENST00000547764 FANCEQ9HB96 536 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms