RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 LTBP4Q8N2S1 1624 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 OR2A25A4D2G3 310 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 CLDN24A6NM45 220 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 DPYSL4O14531 572 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 PEX10O60683 326 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 AP2A1O95782 977 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 STSP08842 583 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 LTA4HP09960 611 aaKnown RBP11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 TIGD7Q6NT04 549 aaPredicted RBP11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 TMEM81Q6P7N7 255 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 CCDC149Q6ZUS6 474 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 PRSS42Q7Z5A4 293 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 BBS7Q8IWZ6 715 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 ANKRD53Q8N9V6 530 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 SLC22A8Q8TCC7 542 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 GIMAP5Q96F15 307 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 UBXN10Q96LJ8 280 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 PPP1R2P1Q96PQ5 205 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 DUSP21Q9H596 190 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 GBA2Q9HCG7 927 aaPredicted RBP11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 B3GNT2Q9NY97 397 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 POLG2Q9UHN1 485 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 PCDHB5Q9Y5E4 795 aa11.69□□□□□ -0.54
RBFOX1-208ENST00000547372 FAM240BA0A1B0GVZ2 78 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 B4DXG7 233 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 HCRTO43612 131 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 TULP3O75386 442 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 CNPP09543 421 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 SLC1A2P43004 574 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 CREMQ03060 361 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 C2orf80Q0P641 193 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 NR6A1Q15406 480 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 VN1R5Q7Z5H4 357 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 ZNF431Q8TF32 576 aaPredicted RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 ANKRD49Q8WVL7 239 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 SLC5A11Q8WWX8 675 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 USP7Q93009 1102 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 REXO5Q96IC2 774 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 SERHL2Q9H4I8 314 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 IFT22Q9H7X7 185 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 CASS4Q9NQ75 786 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 EIF3KQ9UBQ5 218 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 RNF112Q9ULX5 631 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 SNX10Q9Y5X0 201 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 M0R129 80 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 LZTS3O60299 673 aaPredicted RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 RUNDC3AQ59EK9 446 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 PCID2Q5JVF3 399 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 PTRH1Q86Y79 214 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 PHACTR4Q8IZ21 702 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 ZNF675Q8TD23 568 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 GIMAP1Q8WWP7 306 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 GALNT9Q9HCQ5 603 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 MIOSQ9NXC5 875 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 PDP1Q9P0J1 537 aaPredicted RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 DIMT1Q9UNQ2 313 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 PRKAB1Q9Y478 270 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 ALG5Q9Y673 324 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 ARID2Q68CP9 1835 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 FABP12A6NFH5 140 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 M0R082 166 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 HOXC6P09630 235 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 GALNT10Q86SR1 603 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 DENND1CQ8IV53 801 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 SLC22A9Q8IVM8 553 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 FAM9CQ8IZT9 166 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 VWA5B2Q8N398 1253 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 SLC37A3Q8NCC5 494 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 C19orf18Q8NEA5 215 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 ZNF680Q8NEM1 530 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 NLGN4YQ8NFZ3 816 aaPredicted RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 UTP15Q8TED0 518 aaKnown RBP11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 TTPALQ9BTX7 342 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 TTLL2Q9BWV7 592 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 PPA2Q9H2U2 334 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 LIN7BQ9HAP6 207 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 GPR83Q9NYM4 423 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 STOML2Q9UJZ1 356 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 MGAT4AQ9UM21 535 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 GABRQQ9UN88 632 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 NAALAD2Q9Y3Q0 740 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 PCDHGB2Q9Y5G2 931 aa11.68□□□□□ -0.54
RBFOX1-208ENST00000547372 ACKR2O00590 384 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 HPRP00739 348 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 PIRTP0C851 137 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 PIK3CBP42338 1070 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 EEFSECP57772 596 aaKnown RBP11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 FOXM1Q08050 763 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 SNAPC1Q16533 368 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 SOWAHAQ2M3V2 549 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 KLHL12Q53G59 568 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 ZBTB37Q5TC79 503 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 ANKRD54Q6NXT1 300 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 ABHD15Q6UXT9 468 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 ABI3BPQ7Z7G0 1075 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 PIM3Q86V86 326 aa11.67□□□□□ -0.54
RBFOX1-208ENST00000547372 NLGN1Q8N2Q7 840 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms