RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SAT2Q96F10 170 aaPredicted RBP3.41□□□□□ -1.86
CCDC38-204ENST00000546816 SERINC1Q9NRX5 453 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 MAN2C1Q9NTJ4 1040 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 GRIP1Q9Y3R0 1128 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 NME7Q9Y5B8 376 aa3.41□□□□□ -1.86
CCDC38-204ENST00000546816 ZNF644Q9H582 1327 aaPredicted RBP3.41□□□□□ -1.86
CCDC38-204ENST00000546816 ANKUB1A6NFN9 424 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 TMEM221A6NGB7 291 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 RTL8CO15255 209 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 IDH3BO43837 385 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 PRAMEF11O60813 436 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 DDHD2O94830 711 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 HSPA8P11142 646 aaKnown RBP3.4□□□□□ -1.87
CCDC38-204ENST00000546816 PRG2P13727 222 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 PSMB10P40306 273 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 CCR10P46092 362 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 GCNT1Q02742 428 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 LY6DQ14210 128 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 PDLIM3Q53GG5 364 aaPredicted RBP3.4□□□□□ -1.87
CCDC38-204ENST00000546816 FAAH2Q6GMR7 532 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 TEX38Q6PEX7 206 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 TMEM207Q6UWW9 146 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.4□□□□□ -1.87
CCDC38-204ENST00000546816 VANGL1Q8TAA9 524 aaPredicted RBP3.4□□□□□ -1.87
CCDC38-204ENST00000546816 MPP4Q96JB8 637 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 PRICKLE1Q96MT3 831 aaPredicted RBP3.4□□□□□ -1.87
CCDC38-204ENST00000546816 RAD9AQ99638 391 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 OLFM1Q99784 485 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 SOSTQ9BQB4 213 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 THAP2Q9H0W7 228 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 SPHK2Q9NRA0 654 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 ARHGEF38Q9NXL2 777 aa3.4□□□□□ -1.87
CCDC38-204ENST00000546816 SUCLA2Q9P2R7 463 aaPredicted RBP3.4□□□□□ -1.87
CCDC38-204ENST00000546816 PRRC2AP48634 2157 aaKnown RBP3.39□□□□□ -1.87
CCDC38-204ENST00000546816 CROCCQ5TZA2 2017 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 VILLO15195 856 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 VTNP04004 478 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 OR2T7P0C7T2 308 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 VPREB1P12018 145 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 TNFAIP3P21580 790 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 PGFP49763 221 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 CSNK2BP67870 215 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 MS4A2Q01362 244 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 ZNF415Q09FC8 603 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 TAF10Q12962 218 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 FASTKD3Q14CZ7 662 aaKnown RBP3.39□□□□□ -1.87
CCDC38-204ENST00000546816 TNIP1Q15025 636 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 HERC3Q15034 1050 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 DHRS7BQ6IAN0 325 aaPredicted RBP3.39□□□□□ -1.87
CCDC38-204ENST00000546816 TBC1D1Q86TI0 1168 aaPredicted RBP3.39□□□□□ -1.87
CCDC38-204ENST00000546816 Q8NBF4 154 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 C1orf131Q8NDD1 294 aaKnown RBP3.39□□□□□ -1.87
CCDC38-204ENST00000546816 OR1L3Q8NH93 324 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 DHX58Q96C10 678 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 ZNF486Q96H40 463 aaPredicted RBP3.39□□□□□ -1.87
CCDC38-204ENST00000546816 PAFAH2Q99487 392 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 TRIM6Q9C030 488 aaPredicted RBP3.39□□□□□ -1.87
CCDC38-204ENST00000546816 TBC1D17Q9HA65 648 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 OR6C2Q9NZP2 312 aa3.39□□□□□ -1.87
CCDC38-204ENST00000546816 A0A1W2PR80 420 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 ENO4A6NNW6 628 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 GLRA3O75311 464 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 AVILO75366 819 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 CDK2AP2O75956 126 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 SEC24AO95486 1093 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 TRIM21P19474 475 aaKnown RBP3.38□□□□□ -1.87
CCDC38-204ENST00000546816 RPL21P46778 160 aaKnown RBP3.38□□□□□ -1.87
CCDC38-204ENST00000546816 ARF3P61204 181 aaPredicted RBP3.38□□□□□ -1.87
CCDC38-204ENST00000546816 ARF1P84077 181 aaKnown RBP3.38□□□□□ -1.87
CCDC38-204ENST00000546816 DDX10Q13206 875 aaKnown RBP3.38□□□□□ -1.87
CCDC38-204ENST00000546816 ELFN2Q5R3F8 820 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 FAM180BQ6P0A1 224 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 CDK20Q8IZL9 346 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 TEX19Q8NA77 164 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 CCDC107Q8WV48 283 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 NECTIN4Q96NY8 510 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 CDRT15Q96T59 188 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 URM1Q9BTM9 101 aaKnown RBP3.38□□□□□ -1.87
CCDC38-204ENST00000546816 Q9N2K0 584 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 SPHK1Q9NYA1 384 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 WBP11Q9Y2W2 641 aaKnown RBP3.38□□□□□ -1.87
CCDC38-204ENST00000546816 LAS1LQ9Y4W2 734 aaKnown RBP3.38□□□□□ -1.87
CCDC38-204ENST00000546816 ITIH6Q6UXX5 1313 aa3.38□□□□□ -1.87
CCDC38-204ENST00000546816 AGAP14A8MT82 685 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 B4DLN1 442 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 CTDSP2O14595 271 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 AP3D1O14617 1153 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 ADAMDEC1O15204 470 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 C22orf31O95567 290 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 CDH3P22223 829 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 PRKACGP22612 351 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 PTGER3P43115 390 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 MRPL12P52815 198 aaKnown RBP3.37□□□□□ -1.87
CCDC38-204ENST00000546816 CYCSP99999 105 aaKnown RBP3.37□□□□□ -1.87
CCDC38-204ENST00000546816 PAX8Q06710 450 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 LMOD3Q0VAK6 560 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 ODF4Q2M2E3 257 aa3.37□□□□□ -1.87
CCDC38-204ENST00000546816 MOGAT2Q3SYC2 334 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms