RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 OR10G2Q8NGC3 310 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 FRG2BQ96QU4 278 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 MANBAO00462 879 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 KLHL18O94889 574 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 NDUFS1P28331 727 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 MNDAP41218 407 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 RABGGTBP53611 331 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 USP30Q70CQ3 517 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 TAS1R3Q7RTX0 852 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 RIT1Q92963 219 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 SLC22A18Q96BI1 424 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 AURKBQ96GD4 344 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 DSN1Q9H410 356 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 TMEM9Q9P0T7 183 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 NEMP2A6NFY4 417 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 SCN2BO60939 215 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 IGFALSP35858 605 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 RORCP51449 518 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 PITPNAQ00169 270 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 RAPSNQ13702 412 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 TUBA3CQ13748 450 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 SEMA3AQ14563 771 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 ADNP2Q6IQ32 1131 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 GET4Q7L5D6 327 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 GOLGA7Q7Z5G4 137 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 AMZ2Q86W34 360 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 CCDC36Q8IYA8 594 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 MEIOBQ8N635 442 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 CD99L2Q8TCZ2 262 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 CYP2S1Q96SQ9 504 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 GPN3Q9UHW5 284 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 PCDHGB7Q9Y5F8 929 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 PCDHGB1Q9Y5G3 927 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 OR51F1A6NGY5 319 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 IQCF5A8MTL0 148 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 C15orf39Q6ZRI6 1047 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 OR2AP1Q8NGE2 309 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 SNX33Q8WV41 574 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 CANT1Q8WVQ1 401 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 CMTM7Q96FZ5 175 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 MAPKAP1Q9BPZ7 522 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 NFKBIEO00221 500 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 FGF3P11487 239 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 MTHFD1P11586 935 aaKnown RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 CYP4F8P98187 520 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 MS4A13Q5J8X5 152 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 ZNF678Q5SXM1 525 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 CCDC80Q76M96 950 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 GTPBP3Q969Y2 492 aaKnown RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 MCUBQ9NWR8 336 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 NKX1-2Q9UD57 310 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 C7P10643 843 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 HAPLN1P10915 354 aaPredicted RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ATP1B2P14415 290 aaPredicted RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 GSK3BP49841 420 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 OR2T5Q6IEZ7 315 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 PAMR1Q6UXH9 720 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 CAND1Q86VP6 1230 aaKnown RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 OR2T29Q8NH02 315 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 BRI3BPQ8WY22 251 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 HTRA1Q92743 480 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 CCDC106Q9BWC9 280 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 MRPS30Q9NP92 439 aaKnown RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 CFL2Q9Y281 166 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 GPC6Q9Y625 555 aaPredicted RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 OAS3Q9Y6K5 1087 aaKnown RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 EFCAB9A8MZ26 197 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ANKRD66B4E2M5 251 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 CLIC1O00299 241 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 NOBOXO60393 691 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 RFPL1O75677 317 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 HMGN1P05114 100 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 MYCLP1P12525 358 aaPredicted RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 DSTNP60981 165 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 C11orf16Q9NQ32 467 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 GALNT8Q9NY28 637 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 P2RX2Q9UBL9 471 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 OAZ3Q9UMX2 235 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 J3KR12 359 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ALDH3A2P51648 485 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 RPS24P62847 133 aaKnown RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 JAG1P78504 1218 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ABHD18Q0P651 414 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 GPR17Q13304 367 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 DBF4BQ8NFT6 615 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 OR14C36Q8NHC7 312 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 KCNJ9Q92806 393 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 TMBIM1Q969X1 311 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 SLC2A6Q9UGQ3 507 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 TELO2Q9Y4R8 837 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ARVCFO00192 962 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 TEX28O15482 410 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 UGT1A3P35503 534 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 ATAT1Q5SQI0 421 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 PDE12Q6L8Q7 609 aaKnown RBP12.25□□□□□ -0.45
COL4A6-209ENST00000545689 SLC25A24Q6NUK1 477 aa12.25□□□□□ -0.45
COL4A6-209ENST00000545689 KLHDC10Q6PID8 442 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms