RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SYCP2Q9BX26 1530 aa4□□□□□ -1.77
SNHG1-224ENST00000545688 CROCCQ5TZA2 2017 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 HYKKA2RU49 373 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-224ENST00000545688 ZNF195O14628 629 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 MITFO75030 526 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-224ENST00000545688 ACADSP16219 412 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 CA6P23280 308 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 GARSP41250 739 aaKnown RBP3.99□□□□□ -1.77
SNHG1-224ENST00000545688 PPFIBP2Q8ND30 876 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 OR13J1Q8NGT2 312 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 OR2AJ1Q8NGZ0 328 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 PIGQQ9BRB3 760 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 S1PR5Q9H228 398 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 DPAGT1Q9H3H5 408 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 HRH4Q9H3N8 390 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 CCDC177Q9NQR7 707 aaPredicted RBP3.99□□□□□ -1.77
SNHG1-224ENST00000545688 EPHA6Q9UF33 1036 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 KLK13Q9UKR3 277 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 MTUS1Q9ULD2 1270 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 WDR37Q9Y2I8 494 aa3.99□□□□□ -1.77
SNHG1-224ENST00000545688 PLEKHH2Q8IVE3 1493 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 SCAF11Q99590 1463 aaKnown RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 ABCA7Q8IZY2 2146 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 SUPT6HQ7KZ85 1726 aaKnown RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 EEA1Q15075 1411 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 CASKIN1Q8WXD9 1431 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 TET3O43151 1660 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 A0A087X0M5 115 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 A0A1B0GX30 115 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 USO1O60763 962 aaKnown RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 CREG1O75629 220 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 NXPH2O95156 264 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 MBD4O95243 580 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 ZSCAN5DPP0CG00 497 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 ACADMP11310 421 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 TLX1P31314 330 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 HNF4AP41235 474 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 PDX1P52945 283 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 E2F5Q15329 346 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 GLIPR1L2Q4G1C9 344 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 C2CD6Q53TS8 623 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 PAQR6Q6TCH4 344 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 LRRTM1Q86UE6 522 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 MARVELD2Q8N4S9 558 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 LRRC59Q96AG4 307 aaKnown RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 OMA1Q96E52 524 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 RTN4RQ9BZR6 473 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 ZNF701Q9NV72 531 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 SEPT11Q9NVA2 429 aaKnown RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 LARSQ9P2J5 1176 aaKnown RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 CSAG2Q9Y5P2 127 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 COL16A1Q07092 1604 aaPredicted RBP3.98□□□□□ -1.77
SNHG1-224ENST00000545688 CAMSAP2Q08AD1 1489 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 LRRC9Q6ZRR7 1453 aa3.98□□□□□ -1.77
SNHG1-224ENST00000545688 SETBP1Q9Y6X0 1596 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 ZNF644Q9H582 1327 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-224ENST00000545688 ROBO1Q9Y6N7 1651 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 PRDM15P57071 1507 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-224ENST00000545688 LNP1A1A4G5 178 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 MEX3AA1L020 520 aaKnown RBP3.97□□□□□ -1.77
SNHG1-224ENST00000545688 PGPEP1LA6NFU8 196 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 LRRC72A6NJI9 287 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 HEPACAM2A8MVW5 462 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 AZU1P20160 251 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 UGT1A4P22310 534 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 HADHAP40939 763 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 GSDMDP57764 484 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 TMF1P82094 1093 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 NECTIN1Q15223 517 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 HLA-BQ31612 363 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 GORABQ5T7V8 394 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 FIP1L1Q6UN15 594 aaKnown RBP3.97□□□□□ -1.77
SNHG1-224ENST00000545688 PTAR1Q7Z6K3 402 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-224ENST00000545688 AACSQ86V21 672 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 HOGA1Q86XE5 327 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 LMNTD2Q8IXW0 634 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 ADGRF2Q8IZF7 708 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 AZIN2Q96A70 460 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 NSMCE3Q96MG7 304 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 HACL1Q9UJ83 578 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 ZHX1Q9UKY1 873 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-224ENST00000545688 ANGPTL3Q9Y5C1 460 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 CDC42BPAQ5VT25 1732 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 LRRIQ1Q96JM4 1722 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 ERVK-7P63135 1459 aa3.97□□□□□ -1.77
SNHG1-224ENST00000545688 RGS12O14924 1447 aa3.96□□□□□ -1.77
SNHG1-224ENST00000545688 NCOA3Q9Y6Q9 1424 aa3.96□□□□□ -1.77
SNHG1-224ENST00000545688 ABCC3O15438 1527 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 ADAMTS9Q9P2N4 1935 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 PI4KAP2A4QPH2 592 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 XRCC3O43542 346 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 SRSF10O75494 262 aaKnown RBP3.96□□□□□ -1.78
SNHG1-224ENST00000545688 DFFBO76075 338 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 OPRL1P41146 370 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 CXCL9Q07325 125 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 IRF3Q14653 427 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 Q6ZRP5 223 aa3.96□□□□□ -1.78
SNHG1-224ENST00000545688 HAUS6Q7Z4H7 955 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms