RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 FANCCQ00597 558 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 RBBP7Q16576 425 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 ASTE1Q2TB18 679 aaPredicted RBP14.1□□□□□ -0.15
RTN3-214ENST00000545432 ZNF449Q6P9G9 518 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 MFSD7Q6UXD7 560 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 RFX6Q8HWS3 928 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 OR13C4Q8NGS5 318 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 OR5K2Q8NHB8 316 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 ADAMTS18Q8TE60 1221 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.1□□□□□ -0.15
RTN3-214ENST00000545432 MESP1Q9BRJ9 268 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 MENTQ9BUN1 341 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 FICDQ9BVA6 458 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 PACSIN1Q9BY11 444 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 ARNT2Q9HBZ2 717 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 CUTCQ9NTM9 273 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 CAPN11Q9UMQ6 739 aa14.1□□□□□ -0.15
RTN3-214ENST00000545432 SLC5A10A0PJK1 596 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 LIN7AO14910 233 aaPredicted RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 AP2A2O94973 939 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 UNC5CO95185 931 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 CRYABP02511 175 aaKnown RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 PECAM1P16284 738 aaPredicted RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 ITGALP20701 1170 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 ACRV1P26436 265 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 ARG2P78540 354 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 NFKBIBQ15653 356 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 TCTE1Q5JU00 501 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 DENND5AQ6IQ26 1287 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 Q6ZPB1 254 aaPredicted RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 FAM20CQ8IXL6 584 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 KBTBD2Q8IY47 623 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 CTNNBL1Q8WYA6 563 aaPredicted RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 RNF25Q96BH1 459 aaPredicted RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 SOX17Q9H6I2 414 aaPredicted RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 KLHL8Q9P2G9 620 aaPredicted RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 CTSFQ9UBX1 484 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 SEC14L3Q9UDX4 400 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 ASF1AQ9Y294 204 aa14.09□□□□□ -0.15
RTN3-214ENST00000545432 SNRNP200O75643 2136 aaKnown RBP14.09□□□□□ -0.15
RTN3-214ENST00000545432 DYTNA2CJ06 578 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 SMTNL1A8MU46 457 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 BHMG1C9JSJ3 638 aaPredicted RBP14.08□□□□□ -0.16
RTN3-214ENST00000545432 WISP2O76076 250 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 BMP10O95393 424 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 CRTAMO95727 393 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 SERPINA7P05543 415 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 TMEM253P0C7T8 217 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 PRR35P0CG20 571 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 MAGP20916 626 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 PSMA3P25788 255 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 CDKN1CP49918 316 aaPredicted RBP14.08□□□□□ -0.16
RTN3-214ENST00000545432 DYNLT1P63172 113 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 PLOD1Q02809 727 aaPredicted RBP14.08□□□□□ -0.16
RTN3-214ENST00000545432 TFDP2Q14188 446 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 MESDQ14696 234 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 CDSNQ15517 529 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 SLC18A3Q16572 532 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 NDUFAF7Q7L592 441 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 KLHDC8BQ8IXV7 354 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 CLDN19Q8N6F1 224 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 SLC35G2Q8TBE7 412 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 MTFMTQ96DP5 389 aaKnown RBP14.08□□□□□ -0.16
RTN3-214ENST00000545432 IQCDQ96DY2 449 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 FSD1LQ9BXM9 530 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 FAM96AQ9H5X1 160 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 MCCC2Q9HCC0 563 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 ZNF160Q9HCG1 818 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 DDX56Q9NY93 547 aaKnown RBP14.08□□□□□ -0.16
RTN3-214ENST00000545432 PLA2G3Q9NZ20 509 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 MRPS2Q9Y399 296 aaKnown RBP14.08□□□□□ -0.16
RTN3-214ENST00000545432 KLK4Q9Y5K2 254 aa14.08□□□□□ -0.16
RTN3-214ENST00000545432 CACNA1CQ13936 2221 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 HACD1B0YJ81 288 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 CST8O60676 142 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 SRPX2O60687 465 aaPredicted RBP14.07□□□□□ -0.16
RTN3-214ENST00000545432 ANXA9O76027 345 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 ZRANB2O95218 330 aaKnown RBP eCLIP14.07□□□□□ -0.16
RTN3-214ENST00000545432 RASAL1O95294 804 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 CLDN14O95500 239 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 KRT1P04264 644 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 ACPPP15309 386 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 GEMP55040 296 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 TYRO3Q06418 890 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 KLC1Q07866 573 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 GRM7Q14831 915 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 FAM214AQ32MH5 1076 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 ZC3H12BQ5HYM0 836 aaKnown RBP14.07□□□□□ -0.16
RTN3-214ENST00000545432 RIPOR1Q6ZS17 1223 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 SHISA6Q6ZSJ9 500 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 CDH24Q86UP0 819 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 SERPINA9Q86WD7 417 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 LINC01555Q8NAE3 123 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 THAP3Q8WTV1 239 aaPredicted RBP14.07□□□□□ -0.16
RTN3-214ENST00000545432 QKIQ96PU8 341 aaKnown RBP eCLIP14.07□□□□□ -0.161e-6■■■□□ 15.5
RTN3-214ENST00000545432 CRB3Q9BUF7 120 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 NAT10Q9H0A0 1025 aaKnown RBP14.07□□□□□ -0.16
RTN3-214ENST00000545432 GBA3Q9H227 469 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 PCDHGB6Q9Y5F9 930 aa14.07□□□□□ -0.16
RTN3-214ENST00000545432 ISM1B1AKI9 464 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms