RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SPATA22Q8NHS9 363 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 TAS1R2Q8TE23 839 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 U2AF1L4Q8WU68 220 aaKnown RBP5.05□□□□□ -1.6
UBE4A-203ENST00000545354 TMEM203Q969S6 136 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 C12orf43Q96C57 262 aaKnown RBP5.05□□□□□ -1.6
UBE4A-203ENST00000545354 AP2M1Q96CW1 435 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 SHISA4Q96DD7 197 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 ZHX1-C8orf76Q96EF9 292 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 BOD1Q96IK1 185 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 MRGPRX4Q96LA9 322 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 PPP1R16BQ96T49 567 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 SEPT5Q99719 369 aaPredicted RBP5.05□□□□□ -1.6
UBE4A-203ENST00000545354 CERS4Q9HA82 394 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 LRRC4Q9HBW1 653 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 EIF2B3Q9NR50 452 aaKnown RBP5.05□□□□□ -1.6
UBE4A-203ENST00000545354 MED9Q9NWA0 146 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 GDF2Q9UK05 429 aaPredicted RBP5.05□□□□□ -1.6
UBE4A-203ENST00000545354 ELF5Q9UKW6 265 aaPredicted RBP5.05□□□□□ -1.6
UBE4A-203ENST00000545354 SORCS3Q9UPU3 1222 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 RNF24Q9Y225 148 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 GOLT1BQ9Y3E0 138 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 NOC2LQ9Y3T9 749 aaKnown RBP5.05□□□□□ -1.6
UBE4A-203ENST00000545354 PCDHB7Q9Y5E2 793 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 PSAT1Q9Y617 370 aa5.05□□□□□ -1.6
UBE4A-203ENST00000545354 NEDD8-MDP1E9PL57 170 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 H0YGN5 161 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NFKBIEO00221 500 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 COCHO43405 550 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 SLC28A2O43868 658 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 CTNSO60931 367 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 SDC3O75056 442 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 ERN1O75460 977 aaKnown RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 ATE1O95260 518 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 TDP2O95551 362 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 TOP3BO95985 862 aaKnown RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NUDT17P0C025 328 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 C5AR1P21730 350 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 CMA1P23946 247 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 GCAP28676 217 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 GPR4P46093 362 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 PREPP48147 710 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 ZNF41P51814 821 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 ARSFP54793 590 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 CLDN8P56748 225 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 SOX8P57073 446 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 RGS1Q08116 209 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 MAP4K2Q12851 820 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 LCP2Q13094 533 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 DUSP8Q13202 625 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 TNK1Q13470 666 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 EIF4EBP2Q13542 120 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 SLC12A1Q13621 1099 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 LLGL1Q15334 1064 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 KIF19Q2TAC6 998 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NDUFAF6Q330K2 333 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 GPR33Q49SQ1 333 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 RNASE10Q5GAN6 216 aaKnown RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 TCP11X2Q5H9J9 407 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 ATXN7L2Q5T6C5 722 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 KCTD11Q693B1 232 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 KRT80Q6KB66 452 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 AFTPHQ6ULP2 937 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 BBS12Q6ZW61 710 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 ARMCX2Q7L311 632 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 CHST15Q7LFX5 561 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 TMPRSS6Q8IU80 811 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 FOXP4Q8IVH2 680 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 SYT14Q8NB59 555 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 ZSWIM2Q8NEG5 633 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 Q8NFD4 153 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 BPIFCQ8NFQ6 507 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NLGN2Q8NFZ4 835 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NDNFQ8TB73 568 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 CPT1CQ8TCG5 803 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 RAB2BQ8WUD1 216 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 SLC35F5Q8WV83 523 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 BTN2A2Q8WVV5 523 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NR4A3Q92570 626 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 FAM162AQ96A26 154 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 AIDAQ96BJ3 306 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 SLC7A6OSQ96CW6 309 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 TMCO6Q96DC7 493 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 MAGEB18Q96M61 343 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 CASD1Q96PB1 797 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NPAS1Q99742 590 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 APOL4Q9BPW4 351 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 PYM1Q9BRP8 204 aaKnown RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 PCGF1Q9BSM1 259 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 C1QTNF3Q9BXJ4 246 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 YTHDF1Q9BYJ9 559 aaKnown RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 POTEKPQ9BYX7 375 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 PKIBQ9C010 78 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 MFFQ9GZY8 342 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 GGNBP2Q9H3C7 697 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 ANKRD19PQ9H560 264 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 GPN2Q9H9Y4 310 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 CHRAC1Q9NRG0 131 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 SIRT3Q9NTG7 399 aaPredicted RBP5.04□□□□□ -1.6
UBE4A-203ENST00000545354 NCDNQ9UBB6 729 aa5.04□□□□□ -1.6
UBE4A-203ENST00000545354 CLCA2Q9UQC9 943 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms