RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZNF140P52738 457 aaPredicted RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 ECT2LQ008S8 904 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 SRSF11Q05519 484 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 LRP8Q14114 963 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 NANOGP8Q6NSW7 305 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 C11orf88Q6PI97 169 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PRR23CQ6ZRP0 262 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ZDHHC21Q8IVQ6 265 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 NAT16Q8N8M0 369 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 FUBP1Q96AE4 644 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 RPL10LQ96L21 214 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 HEPHQ9BQS7 1158 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 SUV39H2Q9H5I1 410 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 NANOGQ9H9S0 305 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PAPPA2Q9BXP8 1791 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 MROH6A6NGR9 719 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 OR2AG2A6NM03 316 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 LOC730098B7Z3J9 87 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 LDB2O43679 373 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ERN1O75460 977 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 RSL1D1O76021 490 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 LATS1O95835 1130 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ADH1CP00326 375 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 SOD2P04179 222 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ANXA4P09525 319 aaPredicted RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 ATXN1LP0C7T5 689 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 PABPC4LP0CB38 370 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 HSD17B1P14061 328 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ATP1B2P14415 290 aaPredicted RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 GPX3P22352 226 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 GABRB3P28472 473 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 NTSP30990 170 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PTGS2P35354 604 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 HMGCS1Q01581 520 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 LGALS3BPQ08380 585 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PUDPQ08623 228 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 SCRN3Q0VDG4 424 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 MYBPC3Q14896 1274 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 DPY19L1Q2PZI1 675 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 MYLK3Q32MK0 819 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 C6orf136Q5SQH8 315 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ZNF544Q6NX49 715 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 CNKSR3Q6P9H4 555 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PGM2L1Q6PCE3 622 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PAGE2Q7Z2X7 111 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ZFAND4Q86XD8 727 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PHYKPLQ8IUZ5 450 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 TTC9BQ8N6N2 239 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 OR8D1Q8WZ84 308 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 AP3S1Q92572 193 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 OSGEPL1Q9H4B0 414 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ARMC1Q9NVT9 282 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ZNF840PA6NDX5 716 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PRORSD1PA6NEY8 169 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 ZNF99A8MXY4 864 aaPredicted RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 CLDN25C9JDP6 229 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 RGS10O43665 173 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 HPRP00739 348 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PRKAR1AP10644 381 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PABPC1P11940 636 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 SLC6A2P23975 617 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 CTNNB1P35222 781 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 GSTM5P46439 218 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 CDH15P55291 814 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 GRIK2Q13002 908 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 NFATC2Q13469 925 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 DUOXA1Q1HG43 343 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 RTP2Q5QGT7 225 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 PLPP4Q5VZY2 271 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 LRRC66Q68CR7 880 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 SLCO6A1Q86UG4 719 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 SLC15A3Q8IY34 581 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 CMTM7Q96FZ5 175 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 AURKBQ96GD4 344 aaPredicted RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 SLC45A3Q96JT2 553 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 GPATCH1Q9BRR8 931 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 ROGDIQ9GZN7 287 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 MRPL39Q9NYK5 338 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 IL36AQ9UHA7 158 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 RIMS3Q9UJD0 308 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 INSL5Q9Y5Q6 135 aa5.66□□□□□ -1.5
VPS50-220ENST00000544910 OAS3Q9Y6K5 1087 aaKnown RBP5.66□□□□□ -1.5
VPS50-220ENST00000544910 H0YAE9 185 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 hCG_2039718K7EN88 272 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 STX11O75558 287 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 STC2O76061 302 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 VIPR1P32241 457 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 NAE1Q13564 534 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 SEMA3AQ14563 771 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 DSC3Q14574 896 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 GDPD4Q6W3E5 623 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 MDGA1Q8NFP4 955 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 OR2AP1Q8NGE2 309 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 SLC39A13Q96H72 371 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 FEM1AQ9BSK4 669 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 PIGUQ9H490 435 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 RUVBL1Q9Y265 456 aaKnown RBP5.65□□□□□ -1.5
VPS50-220ENST00000544910 ACTL7AQ9Y615 435 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 MYOCOSA0A1B0GUC4 107 aa5.65□□□□□ -1.5
VPS50-220ENST00000544910 SYNDIG1LA6NDD5 238 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms