RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 DHRS12A0PJE2 317 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 C1QTNF3-AMACRE9PGA6 284 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 AHCYL1O43865 530 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 MMP20O60882 483 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 KCNH1O95259 989 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 SOD1P00441 154 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 CAPNS1P04632 268 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 HSPA13P48723 471 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 NEK2P51955 445 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 COL4A3Q01955 1670 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 CHIT1Q13231 466 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 PWP1Q13610 501 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 AAK1Q2M2I8 961 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 LRRK1Q38SD2 2015 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 FAM174BQ3ZCQ3 159 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 DLEU7Q6UYE1 221 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 ERN2Q76MJ5 926 aaKnown RBP16.61■□□□□ 0.25
PTPRO-209ENST00000543886 GPR149Q86SP6 731 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 TRIM74Q86UV6 250 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 MMAAQ8IVH4 418 aaKnown RBP16.61■□□□□ 0.25
PTPRO-209ENST00000543886 YAF2Q8IY57 180 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 SLC22A15Q8IZD6 547 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 LILRA3Q8N6C8 439 aaPredicted RBP16.61■□□□□ 0.25
PTPRO-209ENST00000543886 CANT1Q8WVQ1 401 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 PPM1MQ96MI6 270 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 UHRF1Q96T88 793 aaPredicted RBP16.61■□□□□ 0.25
PTPRO-209ENST00000543886 ARMC1Q9NVT9 282 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 AURKCQ9UQB9 309 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 KIF26AQ9ULI4 1882 aaPredicted RBP16.6■□□□□ 0.25
PTPRO-209ENST00000543886 RNASEH1O60930 286 aaKnown RBP16.6■□□□□ 0.25
PTPRO-209ENST00000543886 IL6P05231 212 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 FESP07332 822 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 LYNP07948 512 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 JUPP14923 745 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 BDKRB1P46663 353 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 IRF8Q02556 426 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 RUNX3Q13761 415 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 GTF2H3Q13889 308 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 KIAA0040Q15053 153 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 BCL7AQ4VC05 210 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 USP39Q53GS9 565 aaKnown RBP16.6■□□□□ 0.25
PTPRO-209ENST00000543886 TBCELQ5QJ74 424 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 FRG2Q64ET8 278 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 THOC6Q86W42 341 aaKnown RBP16.6■□□□□ 0.25
PTPRO-209ENST00000543886 PTRH1Q86Y79 214 aaKnown RBP16.6■□□□□ 0.25
PTPRO-209ENST00000543886 TRAPPC5Q8IUR0 188 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 MED8Q96G25 268 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 FRG2BQ96QU4 278 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 CGREF1Q99674 301 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 SH3GL3Q99963 347 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 OR2AG1Q9H205 316 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 CCM2LQ9NUG4 571 aaPredicted RBP16.6■□□□□ 0.25
PTPRO-209ENST00000543886 STOX2Q9P2F5 926 aaPredicted RBP16.6■□□□□ 0.25
PTPRO-209ENST00000543886 H3BM21 787 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 K7ESM1 405 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 AKAP10O43572 662 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 UGDHO60701 494 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 TIPRLO75663 272 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 BCKDHAP12694 445 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 IL10P22301 178 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 MAPK1P28482 360 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 OPRD1P41143 372 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 GRM2Q14416 872 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 TMEM52BQ4KMG9 183 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 AGTRAPQ6RW13 159 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 SUSD1Q6UWL2 747 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 EP400NLQ6ZTU2 488 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 NLRP8Q86W28 1048 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 FAM9CQ8IZT9 166 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 GALNT4Q8N4A0 578 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 CXorf40AQ8TE69 158 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 NUDT8Q8WV74 236 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 CMTM7Q96FZ5 175 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 CLMPQ9H6B4 373 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 CNOT11Q9UKZ1 510 aaKnown RBP16.6■□□□□ 0.25
PTPRO-209ENST00000543886 CDH7Q9ULB5 785 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 RAB26Q9ULW5 256 aa16.6■□□□□ 0.25
PTPRO-209ENST00000543886 EPHX1P07099 455 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 PRPH2P23942 346 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 HTR1EP28566 365 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 IL12RB1P42701 662 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 RPS14P62263 151 aaKnown RBP16.59■□□□□ 0.25
PTPRO-209ENST00000543886 PLIN5Q00G26 463 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 NAE1Q13564 534 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 MAPKAPK3Q16644 382 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 XKR6Q5GH73 641 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 SPANXN4Q5MJ08 99 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 LIPJQ5W064 366 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 KRTCAP2Q8N6L1 136 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 CLHC1Q8NHS4 586 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 FOXJ1Q92949 421 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 ERLEC1Q96DZ1 483 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 TSC22D3Q99576 134 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 NKX2-4Q9H2Z4 354 aa16.59■□□□□ 0.25
PTPRO-209ENST00000543886 HNRNPRO43390 633 aaKnown RBP16.58■□□□□ 0.25
PTPRO-209ENST00000543886 PRAMEF4O60810 478 aa16.58■□□□□ 0.25
PTPRO-209ENST00000543886 PGRP06401 933 aa16.58■□□□□ 0.25
PTPRO-209ENST00000543886 GPIP06744 558 aa16.58■□□□□ 0.25
PTPRO-209ENST00000543886 MTHFD1P11586 935 aaKnown RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms