RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 ERVW-1Q9UQF0 538 aa15.69■□□□□ 0.1
SCNN1A-221ENST00000543768 KIAA0355O15063 1070 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CLOCKO15516 846 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 LEFTY1O75610 366 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 PRSS23O95084 383 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 NFKBIAP25963 317 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 DDX6P26196 483 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 RPS9P46781 194 aaKnown RBP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 RPS14P62263 151 aaKnown RBP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 DMC1Q14565 340 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 GTDC1Q4AE62 458 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CYBRD1Q53TN4 286 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 ELMSAN1Q6PJG2 1045 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 Q6ZVL8 140 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 MAGEE2Q8TD90 523 aaPredicted RBP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 VPS50Q96JG6 964 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 HEPHQ9BQS7 1158 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 FAM83DQ9H4H8 585 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CARS2Q9HA77 564 aaKnown RBP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 SMPD3Q9NY59 655 aaPredicted RBP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 SLC22A14Q9Y267 594 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 HCFC2Q9Y5Z7 792 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CEPT1Q9Y6K0 416 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 H3BSA7 217 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 SLC16A5O15375 505 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CLIC3O95833 236 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 RHOP08100 348 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 RAP2AP10114 183 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 VIPR1P32241 457 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CDH15P55291 814 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CLDN8P56748 225 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 TUBA4AP68366 448 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 SP140Q13342 867 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 ZNF77Q15935 545 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 DNAJC14Q6Y2X3 702 aaPredicted RBP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 RASGRP3Q8IV61 690 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 FAM86B1Q8N7N1 296 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 NAT16Q8N8M0 369 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CYB5D2Q8WUJ1 264 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CYGBQ8WWM9 190 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 SORCS1Q8WY21 1168 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 FBXL20Q96IG2 436 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 MRGPRX3Q96LB0 322 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 PAIP1Q9H074 479 aaKnown RBP15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CD320Q9NPF0 282 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 RHBDL2Q9NX52 303 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 SNX6Q9UNH7 406 aa15.68■□□□□ 0.1
SCNN1A-221ENST00000543768 CCDC160A6NGH7 325 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 TRIM64A6NGJ6 449 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 TTC34A8MYJ7 566 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 CYP2A6P11509 494 aaPredicted RBP15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 PTPN2P17706 415 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 PRPH2P23942 346 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 RECQLP46063 649 aaPredicted RBP15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 DCDC1P59894 354 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 SFSWAPQ12872 951 aaKnown RBP15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 KCTD21Q4G0X4 260 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 ARSIQ5FYB1 569 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 PLPP4Q5VZY2 271 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 B3GNT6Q6ZMB0 384 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 DHRSXQ8N5I4 330 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 BEND7Q8N7W2 519 aaPredicted RBP15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 MRPL43Q8N983 215 aaKnown RBP15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 FIG4Q92562 907 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 TMIGD2Q96BF3 282 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 ELOVL6Q9H5J4 265 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 PCDH12Q9NPG4 1184 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 SERHLQ9NQF3 203 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 PCDHB14Q9Y5E9 798 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 PCDHGA4Q9Y5G9 962 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 FADS3Q9Y5Q0 445 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 TRIM64CA6NLI5 447 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 ZBBXA8MT70 800 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 SNAP29O95721 258 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 CTSLP07711 333 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 TIMP2P16035 220 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 CYP2A7P20853 494 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 TACR1P25103 407 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 CAPGP40121 348 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 ETV3P41162 512 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 FAM98BQ52LJ0 330 aaKnown RBP15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 TTC33Q6PID6 262 aaPredicted RBP15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 NEK10Q6ZWH5 1172 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 ELMO1Q92556 727 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 BLOC1S6Q9UL45 172 aa15.67■□□□□ 0.1
SCNN1A-221ENST00000543768 A0A0J9YVX5 310 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 ELOVL7A1L3X0 281 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 FADS2P1A8MWK0 482 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 NPIPB8E9PQR5 432 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 KPNA5O15131 536 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 PRPS2P11908 318 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 PCNAP12004 261 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 CDH2P19022 906 aaPredicted RBP15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 POLR2EP19388 210 aaKnown RBP15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 ITPKAP23677 461 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 AP1S2P56377 157 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 PFN3P60673 137 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 CHRNB3Q05901 458 aa15.66■□□□□ 0.1
SCNN1A-221ENST00000543768 NKG7Q16617 165 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms