RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 ARMC3Q5W041 872 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 FIGLAQ6QHK4 219 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 ZNF534Q76KX8 674 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 LDB1Q86U70 411 aaPredicted RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 TRIM73Q86UV7 250 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 MCATQ8IVS2 390 aaKnown RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 DNAJC22Q8N4W6 341 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 ZNF655Q8N720 491 aaPredicted RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 GLIS1Q8NBF1 620 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 CLEC1AQ8NC01 280 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 OR2L8Q8NGY9 312 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 CALML6Q8TD86 181 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 GRK7Q8WTQ7 553 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 ANP32BQ92688 251 aaKnown RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 PTERQ96BW5 349 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 RUFY1Q96T51 708 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 KIFC1Q9BW19 673 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 EPN3Q9H201 632 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 FAM60AQ9NP50 221 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 SLAMF7Q9NQ25 335 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 SPHK1Q9NYA1 384 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 UTP6Q9NYH9 597 aaKnown RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 EURLQ9NYK6 297 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 MAP10Q9P2G4 905 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 SOX13Q9UN79 622 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 PTRH2Q9Y3E5 179 aaKnown RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 JRKLQ9Y4A0 524 aa6.9□□□□□ -1.3
NUP43-206ENST00000543637 PCDHGA9Q9Y5G4 932 aaKnown RBP6.9□□□□□ -1.3
NUP43-206ENST00000543637 COL6A6A6NMZ7 2263 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 GOLGA6L10A0A0M3HER8 536 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 ZSCAN9O15535 394 aaPredicted RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 ZBTB14O43829 449 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 SRPX2O60687 465 aaPredicted RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 DNAJB5O75953 348 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 C1orf105O95561 183 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 ESR1P03372 595 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 TPBGLP0DKB5 382 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 CBSLP0DN79 551 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 PKMP14618 531 aaKnown RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 NR1D1P20393 614 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 ITGAXP20702 1163 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 OGNP20774 298 aaKnown RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 MAGP20916 626 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 PKLRP30613 574 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 CBSP35520 551 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 HSD17B2P37059 387 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 VPS41P49754 854 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 CHAF1BQ13112 559 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 TSTA3Q13630 321 aaPredicted RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 DHX34Q14147 1143 aaKnown RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 GRM7Q14831 915 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 NCF4Q15080 339 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 SIX1Q15475 284 aaPredicted RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 IGFBP7Q16270 282 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 CYP2A13Q16696 494 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 DEFB110Q30KQ9 67 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 TTLL9Q3SXZ7 439 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 ANKRD20A4Q4UJ75 823 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 YOD1Q5VVQ6 348 aaPredicted RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 LCN10Q6JVE6 187 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 NEPROQ6NW34 567 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 CCDC137Q6PK04 289 aaKnown RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 CES3Q6UWW8 571 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 TTLL10Q6ZVT0 673 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 MICALCLQ6ZW33 695 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 TAX1BP1Q86VP1 789 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 VRK3Q8IV63 474 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 PALM2Q8IXS6 379 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 LMNTD2Q8IXW0 634 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 MFSD3Q96ES6 412 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 NRTNQ99748 197 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 TRIM55Q9BYV6 548 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 P2RY12Q9H244 342 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 XAB2Q9HCS7 855 aaKnown RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 ATP13A2Q9NQ11 1180 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 TREX1Q9NSU2 369 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 INTS10Q9NVR2 710 aaKnown RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 SYBUQ9NX95 663 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 GPR83Q9NYM4 423 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 C5AR2Q9P296 337 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 MARCH4Q9P2E8 410 aaPredicted RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 DHCR7Q9UBM7 475 aaKnown RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 CRYL1Q9Y2S2 319 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 MAD1L1Q9Y6D9 718 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 FAM169AQ9Y6X4 670 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 NUP210LQ5VU65 1888 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 SNRNP200O75643 2136 aaKnown RBP6.89□□□□□ -1.31
NUP43-206ENST00000543637 ITPR1Q14643 2758 aa6.89□□□□□ -1.31
NUP43-206ENST00000543637 ZFHX4Q86UP3 3567 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 IGSF10Q6WRI0 2623 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.88□□□□□ -1.31
NUP43-206ENST00000543637 FAM237BA0A1B0GVD1 139 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 PABPN1LA6NDY0 278 aaKnown RBP6.88□□□□□ -1.31
NUP43-206ENST00000543637 GOLGA8KD6RF30 607 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 GOLGA8TH3BQL2 631 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 K7EM74 188 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 TXNDC9O14530 226 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 DSCR3O14972 297 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 USP1O94782 785 aa6.88□□□□□ -1.31
NUP43-206ENST00000543637 IPO13O94829 963 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms