RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 FOXJ1Q92949 421 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PYCR2Q96C36 320 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZBED6CLQ96FA7 236 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 Q96MT0 163 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ADAP2Q9NPF8 381 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PDP2Q9P2J9 529 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SERTAD3Q9UJW9 196 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CDH7Q9ULB5 785 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PPT2Q9UMR5 302 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SNX7Q9UNH6 387 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 BAZ2AQ9UIF9 1905 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 A0A0D9SEW6 157 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 MEIS3P2A8K0S8 358 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 LIN7AO14910 233 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM58BPP0C7Q3 252 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SAGP10523 405 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 EPCAMP16422 314 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 EN2P19622 333 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 POLR2JP52435 117 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SLBPQ14493 270 aaKnown RBP eCLIP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF460Q14592 562 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ARHGAP40Q5TG30 622 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TTC23Q5W5X9 447 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 GALNT18Q6P9A2 607 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ADGRD1Q6QNK2 874 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PAQR3Q6TCH7 311 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CYP2U1Q7Z449 544 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 KIAA2013Q8IYS2 634 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TXNDC5Q8NBS9 432 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 OR4E2Q8NGC2 313 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 MAGEE2Q8TD90 523 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ADAMTS19Q8TE59 1207 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZHX1-C8orf76Q96EF9 292 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PPM1MQ96MI6 270 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 FEM1AQ9BSK4 669 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TUBB1Q9H4B7 451 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SERHL2Q9H4I8 314 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SERHLQ9NQF3 203 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 C1orf109Q9NX04 203 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SAMD4AQ9UPU9 718 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CNTN6Q9UQ52 1028 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM98Q9Y2Y6 226 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 MAP4K5Q9Y4K4 846 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SCN11AQ9UI33 1791 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 A0A0G2JN53 185 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 XKRYO14609 159 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 PTGESO14684 152 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 MGRN1O60291 552 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CST1P01037 141 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 RAD52P43351 418 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 SEPHS1P49903 392 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CHAF1BQ13112 559 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 UBAP2LQ14157 1087 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 IFI44LQ53G44 452 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 MBOAT1Q6ZNC8 495 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM139Q8IV31 216 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 KCT2Q8NC54 265 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM3CQ92520 227 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 EBPLQ9BY08 206 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TFB2MQ9H5Q4 396 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TAC3Q9UHF0 121 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 MAGEL2Q9UJ55 1249 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CNOT6Q9ULM6 557 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CAMK2AQ9UQM7 478 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 HAS3O00219 553 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 NPC1O15118 1278 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TP73O15350 636 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 STC2O76061 302 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 ZCCHC18P0CG32 403 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 GIMD1P0DJR0 217 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TYRP1P17643 537 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 PRKCHP24723 683 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 OXTRP30559 389 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 NTHL1P78549 312 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CREB5Q02930 508 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC34A1Q06495 639 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 KLHL12Q53G59 568 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 GCNT6Q5T4J0 391 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TXNRD3NBQ6F5E7 133 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 DPY19L3Q6ZPD9 716 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 MRPL10Q7Z7H8 261 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TCEAL8Q8IYN2 117 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 OR8H3Q8N146 312 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TMEM156Q8N614 296 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CLDN19Q8N6F1 224 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM98AQ8NCA5 519 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 HIC2Q96JB3 615 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 WDR92Q96MX6 357 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 ELL3Q9HB65 397 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 PACSIN3Q9UKS6 424 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CAPN14A8MX76 684 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 ERI3O43414 337 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CLPTM1O96005 669 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 HOXB6P17509 224 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 TCEA1P23193 301 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 STK19P49842 368 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 AFF3P51826 1226 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 ITGA1P56199 1179 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 CLLU1OSQ5K130 101 aa6.75□□□□□ -1.33
SRGAP1-206ENST00000543397 GPRC6AQ5T6X5 926 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms