RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 TMEM139Q8IV31 216 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 MFN1Q8IWA4 741 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 RCOR2Q8IZ40 523 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 LGI2Q8N0V4 545 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 BBS5Q8N3I7 341 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 NKAPQ8N5F7 415 aaKnown RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 EMC1Q8N766 993 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.44□□□□□ -1.7
MDM2-228ENST00000542502 KCTD6Q8NC69 237 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 EXD1Q8NHP7 514 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 JOSD2Q8TAC2 188 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 MAIP1Q8WWC4 291 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 NDRG1Q92597 394 aaKnown RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 CLDN23Q96B33 292 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 HAUS1Q96CS2 278 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 LRRC46Q96FV0 321 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 PIWIL1Q96J94 861 aaKnown RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 ZNF830Q96NB3 372 aaPredicted RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 PPP1R2P1Q96PQ5 205 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 NAP1L3Q99457 506 aaPredicted RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 PRMT1Q99873 361 aaKnown RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 ZNF670Q9BS34 389 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 FRMD8P1Q9BZ68 369 aaPredicted RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 PLA2G2FQ9BZM2 168 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 LINC00597Q9H2U6 94 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 DHX35Q9H5Z1 703 aaKnown RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 HPS4Q9NQG7 708 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 HEBP1Q9NRV9 189 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 HOMER3Q9NSC5 361 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 DNAJC17Q9NVM6 304 aaKnown RBP4.44□□□□□ -1.7
MDM2-228ENST00000542502 TMEM248Q9NWD8 314 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 GTSE1Q9NYZ3 720 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 COX16Q9P0S2 106 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 SUN2Q9UH99 717 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 AMACRQ9UHK6 382 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 MUTYHQ9UIF7 546 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 CDH22Q9UJ99 828 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 FZD10Q9ULW2 581 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 SCML1Q9UN30 329 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 ALG6Q9Y672 507 aa4.44□□□□□ -1.7
MDM2-228ENST00000542502 MYOFQ9NZM1 2061 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 LOC102723971A0A1B0GUV8 181 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 A0A1W2PQ67 120 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 TARSL2A2RTX5 802 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 FAM234BA2RU67 622 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ARHGAP42A6NI28 874 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 KIF2AO00139 706 aaPredicted RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 RAB27BO00194 218 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 EEF2KO00418 725 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 ALOX15BO15296 676 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 FFAR2O15552 330 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 SMAD6O43541 496 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 SYNCRIPO60506 623 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 TBL1XO60907 577 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 SRGAP2O75044 1071 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 KAT7O95251 611 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 PAPSS2O95340 614 aaPredicted RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 NDST3O95803 873 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RHOCP08134 193 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 APEHP13798 732 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 AOC1P19801 751 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 NFKBIAP25963 317 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 GABRB3P28472 473 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 HOXA6P31267 233 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 HSPA9P38646 679 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 DIO1P49895 249 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 CCR3P51677 355 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RWDD2BP57060 319 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ZXDBP98169 803 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ECT2LQ008S8 904 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ZBTB16Q05516 673 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RAD51Q06609 339 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 GALNT1Q10472 559 aaPredicted RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 CCNIQ14094 377 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ARHGEF7Q14155 803 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RFTN1Q14699 578 aaPredicted RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 SEC23BQ15437 767 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 C15orf59Q2T9L4 293 aaPredicted RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 TFDP3Q5H9I0 405 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 PPP6R3Q5H9R7 873 aaPredicted RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 TMEM31Q5JXX7 168 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RAP1GAP2Q684P5 730 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 DENND2CQ68D51 928 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 PGBD2Q6P3X8 592 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 TMCO3Q6UWJ1 677 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RANBP10Q6VN20 620 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RAD9BQ6WBX8 426 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 TPGS1Q6ZTW0 290 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RFX8Q6ZV50 586 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 KATNAL2Q8IYT4 538 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 CCAR2Q8N163 923 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 UMODL1-AS1Q8N2C9 162 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 SPEM1Q8N4L4 309 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ARFGAP1Q8N6T3 406 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 RTL3Q8N8U3 475 aaKnown RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 ANKRD42Q8N9B4 389 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ZNF527Q8NB42 609 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 ZNF548Q8NEK5 533 aaPredicted RBP4.43□□□□□ -1.7
MDM2-228ENST00000542502 OLIG1Q8TAK6 271 aa4.43□□□□□ -1.7
MDM2-228ENST00000542502 FAM71BQ8TC56 605 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms