RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 BASP1P80723 227 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 COG7P83436 770 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 PPIDQ08752 370 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 NCBP1Q09161 790 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 MRPL28Q13084 256 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 DYNC1I2Q13409 638 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 GTF2H2Q13888 395 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 KRT81Q14533 505 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 SMC1AQ14683 1233 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 PTPN14Q15678 1187 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 SNAPC1Q16533 368 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 RABL6Q3YEC7 729 aaPredicted RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 CBWD6Q4V339 395 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 CBWD3Q5JTY5 395 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 C9orf50Q5SZB4 431 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 NSUN5P2Q63ZY6 315 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 THOC7Q6I9Y2 204 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 OR7E24Q6IFN5 339 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 IRGCQ6NXR0 463 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 GTF2H2CQ6P1K8 395 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 GDPD4Q6W3E5 623 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 ZNF704Q6ZNC4 412 aaPredicted RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 ASB18Q6ZVZ8 466 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 RAPH1Q70E73 1250 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 ADCK2Q7Z695 626 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 SLC9B2Q86UD5 537 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 TMPRSS12Q86WS5 348 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 CCDC50Q8IVM0 306 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 METTL27Q8N6F8 245 aaPredicted RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 ARL10Q8N8L6 244 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 OR8K1Q8NGG5 319 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 OR10S1Q8NGN2 331 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 OR5R1Q8NH85 324 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 SPATA3Q8NHX4 192 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 CCDC110Q8TBZ0 833 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 KIAA1524Q8TCG1 905 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 SLC44A1Q8WWI5 657 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 CTNNBL1Q8WYA6 563 aaPredicted RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 ZNF75CPQ92670 426 aaPredicted RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 ERO1AQ96HE7 468 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 RBM41Q96IZ5 413 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 EGLN2Q96KS0 407 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 EGFL8Q99944 293 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 FERMT1Q9BQL6 677 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 NEURL2Q9BR09 285 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 ABCG4Q9H172 646 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 LRMDAQ9H2I8 198 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 TNMDQ9H2S6 317 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 ST6GALNAC4Q9H4F1 302 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 ANKZF1Q9H8Y5 726 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 TRPV4Q9HBA0 871 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 TXLNGQ9NUQ3 528 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 UBAP1Q9NZ09 502 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 CIDEBQ9UHD4 219 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 KCNG2Q9UJ96 466 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 DBNLQ9UJU6 430 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 PAIP2BQ9ULR5 123 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 PRELID1Q9Y255 219 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 OR2W1Q9Y3N9 320 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 GAKO14976 1311 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 KTN1Q86UP2 1357 aaKnown RBP3.11□□□□□ -1.91
USP28-210ENST00000542033 CCNB3Q8WWL7 1395 aa3.11□□□□□ -1.91
USP28-210ENST00000542033 PPIP5K1Q6PFW1 1433 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 VPS8Q8N3P4 1428 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 ABCC9O60706 1549 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 A0A1W2PS18 150 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 ASPDHA6ND91 283 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 IFITM10A6NMD0 228 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 C16orf97H3BN30 126 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 DVL1O14640 695 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 LSM1O15116 133 aaKnown RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 ZBTB43O43298 467 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 ATP6V1G1O75348 118 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 ZNF189O75820 626 aaPredicted RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 SIX3O95343 332 aaPredicted RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 YEATS4O95619 227 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 TRUB2O95900 331 aaKnown RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 PENKP01210 267 aaPredicted RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 FAM106CPP0CH98 169 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 SFTPCP11686 197 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 CASTP20810 708 aaKnown RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 NR2F2P24468 414 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 HSPA1LP34931 641 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 HSPA4P34932 840 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 BMXP51813 675 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 DVL1P1P54792 670 aaPredicted RBP3.1□□□□□ -1.91
USP28-210ENST00000542033 UBXN1Q04323 297 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 RALGDSQ12967 914 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 PPP2R5CQ13362 524 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 ZNF273Q14593 569 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 DLG2Q15700 870 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 KLHL40Q2TBA0 621 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 ACCSLQ4AC99 568 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 KRTCAP3Q53RY4 240 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 FAM76BQ5HYJ3 339 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 PDSS1Q5T2R2 415 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 TMEM198Q66K66 360 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 PLBD1Q6P4A8 553 aa3.1□□□□□ -1.91
USP28-210ENST00000542033 IYDQ6PHW0 289 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms