RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 GRIA3P42263 894 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 NSG1P42857 185 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 Q0VFX4 171 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 CYP2A13Q16696 494 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 SLC5A12Q1EHB4 618 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 FCRL6Q6DN72 434 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 ARHGEF18Q6ZSZ5 1173 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 TTLL10Q6ZVT0 673 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 KCNMB4Q86W47 210 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 LRRC57Q8N9N7 239 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 STYXQ8WUJ0 223 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 ZNF778Q96MU6 729 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 IP6K3Q96PC2 410 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 ANP32EQ9BTT0 268 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 LACRTQ9GZZ8 138 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 SOX17Q9H6I2 414 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 OR6C2Q9NZP2 312 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 FEZ2Q9UHY8 353 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 PACSIN2Q9UNF0 486 aaPredicted RBP14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 PLCL2Q9UPR0 1127 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 HS3ST3B1Q9Y662 390 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 SVILO95425 2214 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 DCHS2Q6V1P9 2916 aa14.85□□□□□ -0.03
CLSTN3-213ENST00000541953 CNTRLQ7Z7A1 2325 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 PDZD2O15018 2839 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 ZGRF1Q86YA3 2104 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 GRID2IPA4D2P6 1211 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 STK10O94804 968 aaKnown RBP14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 AP2A1O95782 977 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 ALAS2P22557 587 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 VARSP26640 1264 aaKnown RBP14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 CCR7P32248 378 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 OR1D4P47884 311 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 ITIH4Q14624 930 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 NKG7Q16617 165 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 SYTL3Q4VX76 610 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 TLDC1Q6P9B6 456 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 KIRREL2Q6UWL6 708 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 ZNF534Q76KX8 674 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 TICAM1Q8IUC6 712 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 ZADH2Q8N4Q0 377 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 OR52K1Q8NGK4 314 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 WDR77Q9BQA1 342 aaPredicted RBP14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 C17orf62Q9BQA9 187 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 LRRC40Q9H9A6 602 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 ATP13A2Q9NQ11 1180 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 SRPK3Q9UPE1 567 aa14.84□□□□□ -0.03
CLSTN3-213ENST00000541953 CELSR1Q9NYQ6 3014 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 FTH1P02794 183 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 MMP11P24347 488 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 PSMB5P28074 263 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 YBX1P67809 324 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 KLF1Q13351 362 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 KIR2DS3Q14952 304 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 PARP6Q2NL67 630 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 CCSMST1Q4G0I0 132 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 PRAMEF13Q5VWM6 474 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 ZNF449Q6P9G9 518 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 IGFL2Q6UWQ7 119 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 PRUNE1Q86TP1 453 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 LDB1Q86U70 411 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 MCATQ8IVS2 390 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 PARP9Q8IXQ6 854 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 SLC22A15Q8IZD6 547 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 ST6GALNAC3Q8NDV1 305 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 ACRBPQ8NEB7 543 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 GRHL3Q8TE85 626 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 TMEM121Q9BTD3 319 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 NDC1Q9BTX1 674 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 SYNPO2LQ9H987 977 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 STOX2Q9P2F5 926 aaPredicted RBP14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 POLG2Q9UHN1 485 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 CDC23Q9UJX2 597 aa14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 RUVBL2Q9Y230 463 aaKnown RBP14.83□□□□□ -0.04
CLSTN3-213ENST00000541953 A0A1B0GX78 115 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 LRRTM2O43300 516 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 CTSVO60911 334 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 GOT2P00505 430 aaKnown RBP14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 GSTM1P09488 218 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 RAB28P51157 221 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 RWDD2BP57060 319 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 GSTM4Q03013 218 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 SRSF11Q05519 484 aaKnown RBP14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 AIMP2Q13155 320 aaKnown RBP14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 OVCH1Q7RTY7 1134 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 TMTC1Q8IUR5 882 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 SRRM1Q8IYB3 904 aaKnown RBP14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 KRT222Q8N1A0 295 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 CATSPER1Q8NEC5 780 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 CFAP61Q8NHU2 1237 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 SLC35B2Q8TB61 432 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 PPP4R1Q8TF05 950 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 ATG4AQ8WYN0 398 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 HDAC10Q969S8 669 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 CNDP1Q96KN2 507 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 FERMT1Q9BQL6 677 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 TSPY26PQ9H489 355 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 MARCH4Q9P2E8 410 aaPredicted RBP14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 OSGIN2Q9Y236 505 aa14.82□□□□□ -0.04
CLSTN3-213ENST00000541953 MAU2Q9Y6X3 613 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms