RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 HLA-DPA1P20036 260 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 CES1P23141 567 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 GABRB3P28472 473 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 S100A5P33763 92 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 PHC1P78364 1004 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 OLR1P78380 273 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 CTBP1Q13363 440 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 PWP1Q13610 501 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 CCINQ13939 588 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 KEAP1Q14145 624 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 POU6F1Q14863 301 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 CSRP2Q16527 193 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 DDR2Q16832 855 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 ITPRIPL2Q3MIP1 535 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 VPS26BQ4G0F5 336 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 FBXO43Q4G163 708 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 ATP6AP1LQ52LC2 224 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 UNC50Q53HI1 259 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 TXNDC8Q6A555 127 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 TCEAL6Q6IPX3 200 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 GPRIN1Q7Z2K8 1008 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 ISCA2Q86U28 154 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 AKAP14Q86UN6 197 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 ITIH5Q86UX2 942 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 STK32CQ86UX6 486 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 RALGPS2Q86X27 583 aaPredicted RBP10.18□□□□□ -0.78
CHFR-219ENST00000541341 IPMKQ8NFU5 416 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 HMGCLL1Q8TB92 370 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 ADAM32Q8TC27 787 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 OVCA2Q8WZ82 227 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 TCEAL3Q969E4 200 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 KIAA1191Q96A73 305 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 CHFRQ96EP1 664 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 C1orf74Q96LT6 269 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 MUS81Q96NY9 551 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 HHIPQ96QV1 700 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 HEPHQ9BQS7 1158 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 FUNDC2Q9BWH2 189 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 DERL2Q9GZP9 239 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 KLHL25Q9H0H3 589 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 C8orf33Q9H7E9 229 aaPredicted RBP10.18□□□□□ -0.78
CHFR-219ENST00000541341 SYNDIG1Q9H7V2 258 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 RMI1Q9H9A7 625 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 FBRSL1Q9HCM7 1045 aaKnown RBP10.18□□□□□ -0.78
CHFR-219ENST00000541341 TM9SF3Q9HD45 589 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 FAM118AQ9NWS6 357 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 TAS2R13Q9NYV9 303 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 MKLN1Q9UL63 735 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 FIS1Q9Y3D6 152 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 DNAJC15Q9Y5T4 150 aa10.18□□□□□ -0.78
CHFR-219ENST00000541341 E2F8A0AVK6 867 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 PLOD2O00469 737 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 RGS13O14921 159 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 NUAK1O60285 661 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 SYNCRIPO60506 623 aaKnown RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 WISP3O95389 354 aaPredicted RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 NDST3O95803 873 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 KRT6AP02538 564 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 KRT6BP04259 564 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 JUNP05412 331 aaKnown RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 KRT8P05787 483 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 ZDHHC11BP0C7U3 371 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 TPH1P17752 444 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 MATN1P21941 496 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 FDXRP22570 491 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 CCR1P32246 355 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 COPZ1P61923 177 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 TEKQ02763 1124 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 ACVR1Q04771 509 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 CLCQ05315 142 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 VEPH1Q14D04 833 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 HIST2H2ACQ16777 129 aaPredicted RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 TIMM50Q3ZCQ8 353 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 TOR1AIP1Q5JTV8 583 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 DGKKQ5KSL6 1271 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 IL31Q6EBC2 164 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 ESRP1Q6NXG1 681 aaKnown RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 BHLHA9Q7RTU4 235 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 R3HCC1LQ7Z5L2 792 aaKnown RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 P2RY8Q86VZ1 359 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 PLD3Q8IV08 490 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 SCN4BQ8IWT1 228 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 FBXO39Q8N4B4 442 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 KBTBD8Q8NFY9 601 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 OR6Q1Q8NGQ2 317 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 RHOXF1Q8NHV9 184 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 FBXL20Q96IG2 436 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 MAGEB10Q96LZ2 347 aaPredicted RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 PPP3R2Q96LZ3 170 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 IER2Q9BTL4 223 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 OR2B2Q9GZK3 357 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 LHPPQ9H008 270 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 TKTL2Q9H0I9 626 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 FBXO44Q9H4M3 255 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 SIAEQ9HAT2 523 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 INIPQ9NRY2 104 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 ABCC13Q9NSE7 274 aa10.17□□□□□ -0.78
CHFR-219ENST00000541341 RBM22Q9NW64 420 aaKnown RBP eCLIP10.17□□□□□ -0.78
CHFR-219ENST00000541341 PIH1D1Q9NWS0 290 aaKnown RBP10.17□□□□□ -0.78
CHFR-219ENST00000541341 KLHL3Q9UH77 587 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms