RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 INSCQ1MX18 579 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 DNTTIP2Q5QJE6 756 aaKnown RBP4.46□□□□□ -1.7
SNHG1-214ENST00000540865 HENMT1Q5T8I9 393 aaKnown RBP4.46□□□□□ -1.7
SNHG1-214ENST00000540865 PRAMEF17Q5VTA0 474 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 AGAP7PQ5VUJ5 663 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 TAF3Q5VWG9 929 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 NAA35Q5VZE5 725 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 ERICH6BQ5W0A0 696 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 SCYL2Q6P3W7 929 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 TMEM207Q6UWW9 146 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 GFRALQ6UXV0 394 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 ARHGAP36Q6ZRI8 547 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 CEP97Q8IW35 865 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 SCUBE1Q8IWY4 988 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 BBS5Q8N3I7 341 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 ANKRD20A12PQ8NF67 263 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 TEKT4Q8WW24 435 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 NELFBQ8WX92 580 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 NR4A3Q92570 626 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 KISS1RQ969F8 398 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-214ENST00000540865 SNX21Q969T3 373 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 AGAP4Q96P64 663 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 WDR24Q96S15 920 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 EIF3CQ99613 913 aaKnown RBP4.46□□□□□ -1.7
SNHG1-214ENST00000540865 FOXC2Q99958 501 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 TREX2Q9BQ50 279 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-214ENST00000540865 MGME1Q9BQP7 344 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 ENKD1Q9H0I2 346 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 OR2AG1Q9H205 316 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 CXXC4Q9H2H0 198 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 FAM83DQ9H4H8 585 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 EPS8L2Q9H6S3 715 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 ACTR5Q9H9F9 607 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-214ENST00000540865 TRIM39Q9HCM9 518 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 TNFRSF12AQ9NP84 129 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 SIX2Q9NPC8 291 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 ATXN10Q9UBB4 475 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 SLC23A2Q9UGH3 650 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 PTRH2Q9Y3E5 179 aaKnown RBP4.46□□□□□ -1.7
SNHG1-214ENST00000540865 NEU2Q9Y3R4 380 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 NPFFR2Q9Y5X5 522 aa4.46□□□□□ -1.7
SNHG1-214ENST00000540865 FLNAP21333 2647 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ANK3Q12955 4377 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 FAM170AA1A519 330 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ZC3H12DA2A288 527 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 OR5K3A6NET4 321 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 C22orf46C9J442 243 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 AGPSO00116 658 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 MASP2O00187 686 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 DFFAO00273 331 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 EEF2KO00418 725 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 DAPK3O43293 454 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 CCP110O43303 1012 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 KCNJ13O60928 360 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PEX11BO96011 259 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 CYP1A1P04798 512 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 MMEP08473 750 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PDHA1P08559 390 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 DESP17661 470 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ERCC2P18074 760 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 VCLP18206 1134 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 KLK2P20151 261 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ARL4AP40617 200 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 HALP42357 657 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SPINT3P49223 89 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 EPHB1P54762 984 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 CASP6P55212 293 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 GSCP56915 257 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 STX17P56962 302 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 CORO7P57737 925 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 RPL11P62913 178 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SUMO1P63165 101 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 KRT85P78386 507 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ADORA2A-AS1P86434 159 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 RBPJQ06330 500 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 Q0VFX4 171 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ABRQ12979 859 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PRKD1Q15139 912 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 SEPT7Q16181 437 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 LONRF1Q17RB8 773 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PTCHD3Q3KNS1 767 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 TDRD12Q587J7 1177 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ZNF789Q5FWF6 425 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ZNF569Q5MCW4 686 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ZFYVE27Q5T4F4 411 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 IRAK1BP1Q5VVH5 260 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PDPK2PQ6A1A2 396 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PLEKHA7Q6IQ23 1121 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 KLHL10Q6JEL2 608 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 WDR59Q6PJI9 974 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 B4GALNT4Q76KP1 1039 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PPP1R32Q7Z5V6 425 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ADGRG6Q86SQ4 1221 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 NOP9Q86U38 636 aaKnown RBP4.45□□□□□ -1.7
SNHG1-214ENST00000540865 LRRTM4Q86VH4 590 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 OOSP2Q86WS3 158 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 ZNF677Q86XU0 584 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 PGBD5Q8N414 524 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 OR2Y1Q8NGV0 311 aa4.45□□□□□ -1.7
SNHG1-214ENST00000540865 OR1L3Q8NH93 324 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms