RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 VPS11Q9H270 941 aa15□□□□□ -0.01
DDB1-218ENST00000540784 NMRAL1Q9HBL8 299 aa15□□□□□ -0.01
DDB1-218ENST00000540784 ARL15Q9NXU5 204 aa15□□□□□ -0.01
DDB1-218ENST00000540784 SPHK1Q9NYA1 384 aa15□□□□□ -0.01
DDB1-218ENST00000540784 PSMC3IPQ9P2W1 217 aaPredicted RBP15□□□□□ -0.01
DDB1-218ENST00000540784 MSRB2Q9Y3D2 182 aa15□□□□□ -0.01
DDB1-218ENST00000540784 DCHS1Q96JQ0 3298 aa15□□□□□ -0.01
DDB1-218ENST00000540784 UNC13CQ8NB66 2214 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 CCDC187A0A096LP49 1063 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 MED19A0JLT2 244 aaPredicted RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 KRT87PA6NCN2 255 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 AGRPO00253 132 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 HGSO14964 777 aaPredicted RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 SLC16A8O95907 504 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 ALDOAP04075 364 aaKnown RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 ENO2P09104 434 aaPredicted RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 LTA4HP09960 611 aaKnown RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 CD1DP15813 335 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 CDH3P22223 829 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 KPNA2P52292 529 aaKnown RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 AP1S2P56377 157 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 IFFO1Q0D2I5 559 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 PHKG1Q16816 387 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 FBXO38Q6PIJ6 1188 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 TIFABQ6ZNK6 161 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 RAB11FIP2Q7L804 512 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 CARFQ8N187 725 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 FBXO39Q8N4B4 442 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 LINC01555Q8NAE3 123 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 AGBL5Q8NDL9 886 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 WDR36Q8NI36 951 aaKnown RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 HMGCLL1Q8TB92 370 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 LIN37Q96GY3 246 aaPredicted RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 OR2A14Q96R47 310 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 MAP3K3Q99759 626 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 UNKQ9C0B0 810 aaKnown RBP14.99□□□□□ -0.01
DDB1-218ENST00000540784 C1GALT1Q9NS00 363 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 TBK1Q9UHD2 729 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 IKZF3Q9UKT9 509 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 ANGPTL2Q9UKU9 493 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 POMT2Q9UKY4 750 aa14.99□□□□□ -0.01
DDB1-218ENST00000540784 TLDC2A0PJX2 215 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 NPEPPSL1A6NEC2 478 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 TRABD2BA6NFA1 517 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 TLCD2A6NGC4 264 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 SMIM23A6NLE4 172 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 MAP3K7O43318 606 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 GUCA1CO95843 209 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 NUDT17P0C025 328 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 ANKRD34CP0C6C1 535 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 UGT2B7P16662 529 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 GMPRP36959 345 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 SLCO1A2P46721 670 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 ARL4DP49703 201 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 SEPHS1P49903 392 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 CSRP3P50461 194 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 SHC2P98077 582 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 EIF3IQ13347 325 aaKnown RBP14.98□□□□□ -0.01
DDB1-218ENST00000540784 TSTA3Q13630 321 aaPredicted RBP14.98□□□□□ -0.01
DDB1-218ENST00000540784 FASTKQ14296 549 aaKnown RBP14.98□□□□□ -0.01
DDB1-218ENST00000540784 C16orf72Q14CZ0 275 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 TSNQ15631 228 aaKnown RBP14.98□□□□□ -0.01
DDB1-218ENST00000540784 SF1Q15637 639 aaKnown RBP14.98□□□□□ -0.01
DDB1-218ENST00000540784 FAM83EQ2M2I3 478 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 SPESP1Q6UW49 350 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 SBSNQ6UWP8 590 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 PRSS42Q7Z5A4 293 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 ADAMTSL2Q86TH1 951 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 TAX1BP1Q86VP1 789 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 TDRPQ86YL5 185 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 GPSM1Q86YR5 675 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 SYTL1Q8IYJ3 562 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 OR2W6PQ8NHA6 318 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 STAG3L4Q8TBR4 150 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 ZNF480Q8WV37 535 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 ATL1Q8WXF7 558 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 KLHL6Q8WZ60 621 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 SMPDL3AQ92484 453 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 ISL2Q96A47 359 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 KIAA1191Q96A73 305 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 NXNL1Q96CM4 212 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 TWSG1Q9GZX9 223 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 IGSF5Q9NSI5 407 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 UTP6Q9NYH9 597 aaKnown RBP14.98□□□□□ -0.01
DDB1-218ENST00000540784 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.98□□□□□ -0.01
DDB1-218ENST00000540784 SEMA5BQ9P283 1151 aa14.98□□□□□ -0.01
DDB1-218ENST00000540784 IGHV5-51A0A0C4DH38 117 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 SLC9B1P1A6NJY1 282 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 E7ENX8 843 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 PRICKLE3O43900 615 aaPredicted RBP14.97□□□□□ -0.01
DDB1-218ENST00000540784 KLHL2O95198 593 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 ZBTB11O95625 1053 aaPredicted RBP14.97□□□□□ -0.01
DDB1-218ENST00000540784 MT-ND3P03897 115 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 ERGP11308 486 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 COL6A2P12110 1019 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 OAS2P29728 719 aaKnown RBP14.97□□□□□ -0.01
DDB1-218ENST00000540784 RPA3P35244 121 aaPredicted RBP14.97□□□□□ -0.01
DDB1-218ENST00000540784 MAGEA12P43365 314 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 LSSP48449 732 aa14.97□□□□□ -0.01
DDB1-218ENST00000540784 IRF9Q00978 393 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms