RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TESK1Q15569 626 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 DBN1Q16643 649 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 AGAP7PQ5VUJ5 663 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 FCRL6Q6DN72 434 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 ZC3H18Q86VM9 953 aaKnown RBP7.01□□□□□ -1.29
YBX3-209ENST00000540747 SERPINA9Q86WD7 417 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 KATNAL2Q8IYT4 538 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 TBC1D21Q8IYX1 336 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 CLDN19Q8N6F1 224 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 LINC01555Q8NAE3 123 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 MYRIPQ8NFW9 859 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 OR5K2Q8NHB8 316 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 DNAJB14Q8TBM8 379 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 PSMF1Q92530 271 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 P3H4Q92791 437 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 DNAJC1Q96KC8 554 aaKnown RBP7.01□□□□□ -1.29
YBX3-209ENST00000540747 LURAP1Q96LR2 239 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 AGAP4Q96P64 663 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 LMF1Q96S06 567 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 APOL2Q9BQE5 337 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 TRIM8Q9BZR9 551 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 LHPPQ9H008 270 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 C10orf88Q9H8K7 445 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 MRM3Q9HC36 420 aaKnown RBP7.01□□□□□ -1.29
YBX3-209ENST00000540747 TXLNGQ9NUQ3 528 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 COPG2Q9UBF2 871 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 CTSFQ9UBX1 484 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 PYCARDQ9ULZ3 195 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 PRSS21Q9Y6M0 314 aa7.01□□□□□ -1.29
YBX3-209ENST00000540747 MAP1AP78559 2803 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 APOC4-APOC2K7ER74 178 aa7□□□□□ -1.29
YBX3-209ENST00000540747 DSCR3O14972 297 aa7□□□□□ -1.29
YBX3-209ENST00000540747 NRDCO43847 1150 aa7□□□□□ -1.29
YBX3-209ENST00000540747 PRICKLE3O43900 615 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 JRKO75564 520 aa7□□□□□ -1.29
YBX3-209ENST00000540747 MED26O95402 600 aa7□□□□□ -1.29
YBX3-209ENST00000540747 CRTAMO95727 393 aa7□□□□□ -1.29
YBX3-209ENST00000540747 AP2A1O95782 977 aa7□□□□□ -1.29
YBX3-209ENST00000540747 APOC2P02655 101 aa7□□□□□ -1.29
YBX3-209ENST00000540747 MAGP20916 626 aa7□□□□□ -1.29
YBX3-209ENST00000540747 PSMB4P28070 264 aa7□□□□□ -1.29
YBX3-209ENST00000540747 RBL1P28749 1068 aa7□□□□□ -1.29
YBX3-209ENST00000540747 MC4RP32245 332 aa7□□□□□ -1.29
YBX3-209ENST00000540747 TNNT3P45378 269 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 CDC16Q13042 620 aa7□□□□□ -1.29
YBX3-209ENST00000540747 INAQ16352 499 aa7□□□□□ -1.29
YBX3-209ENST00000540747 ZNF630Q2M218 657 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 TUBB8Q3ZCM7 444 aa7□□□□□ -1.29
YBX3-209ENST00000540747 TFDP3Q5H9I0 405 aa7□□□□□ -1.29
YBX3-209ENST00000540747 YOD1Q5VVQ6 348 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 KCTD11Q693B1 232 aa7□□□□□ -1.29
YBX3-209ENST00000540747 ITPRIPL1Q6GPH6 555 aa7□□□□□ -1.29
YBX3-209ENST00000540747 ISLR2Q6UXK2 745 aa7□□□□□ -1.29
YBX3-209ENST00000540747 PACS1Q6VY07 963 aa7□□□□□ -1.29
YBX3-209ENST00000540747 BNC2Q6ZN30 1099 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 FJX1Q86VR8 437 aa7□□□□□ -1.29
YBX3-209ENST00000540747 MCATQ8IVS2 390 aaKnown RBP7□□□□□ -1.29
YBX3-209ENST00000540747 FAM20CQ8IXL6 584 aa7□□□□□ -1.29
YBX3-209ENST00000540747 ZNF295-AS1Q8N0V1 137 aa7□□□□□ -1.29
YBX3-209ENST00000540747 C17orf53Q8N3J3 647 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 DTWD1Q8N5C7 304 aa7□□□□□ -1.29
YBX3-209ENST00000540747 BCORP1Q8N888 145 aa7□□□□□ -1.29
YBX3-209ENST00000540747 ACBD4Q8NC06 268 aa7□□□□□ -1.29
YBX3-209ENST00000540747 CATSPER1Q8NEC5 780 aa7□□□□□ -1.29
YBX3-209ENST00000540747 ZDHHC19Q8WVZ1 309 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 NR4A3Q92570 626 aa7□□□□□ -1.29
YBX3-209ENST00000540747 DLG3Q92796 817 aa7□□□□□ -1.29
YBX3-209ENST00000540747 HAUS1Q96CS2 278 aa7□□□□□ -1.29
YBX3-209ENST00000540747 CHP1Q99653 195 aa7□□□□□ -1.29
YBX3-209ENST00000540747 NDC1Q9BTX1 674 aa7□□□□□ -1.29
YBX3-209ENST00000540747 GOLPH3Q9H4A6 298 aa7□□□□□ -1.29
YBX3-209ENST00000540747 VPS37BQ9H9H4 285 aa7□□□□□ -1.29
YBX3-209ENST00000540747 LUC7LQ9NQ29 371 aaKnown RBP7□□□□□ -1.29
YBX3-209ENST00000540747 SEMA3GQ9NS98 782 aa7□□□□□ -1.29
YBX3-209ENST00000540747 OLAHQ9NV23 265 aa7□□□□□ -1.29
YBX3-209ENST00000540747 NLE1Q9NVX2 485 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 POLG2Q9UHN1 485 aa7□□□□□ -1.29
YBX3-209ENST00000540747 FEZ2Q9UHY8 353 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 CDC23Q9UJX2 597 aa7□□□□□ -1.29
YBX3-209ENST00000540747 NXT1Q9UKK6 140 aaKnown RBP7□□□□□ -1.29
YBX3-209ENST00000540747 INTUQ9ULD6 942 aa7□□□□□ -1.29
YBX3-209ENST00000540747 KLHL20Q9Y2M5 609 aa7□□□□□ -1.29
YBX3-209ENST00000540747 KLK4Q9Y5K2 254 aa7□□□□□ -1.29
YBX3-209ENST00000540747 NCOA6Q14686 2063 aaPredicted RBP7□□□□□ -1.29
YBX3-209ENST00000540747 MED13LQ71F56 2210 aa7□□□□□ -1.29
YBX3-209ENST00000540747 ANKHD1Q8IWZ3 2542 aaKnown RBP6.99□□□□□ -1.29
YBX3-209ENST00000540747 IGLV3-12A0A075B6K2 115 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 MROH6A6NGR9 719 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 HPP00738 406 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 MCM3P25205 808 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 FOXN2P32314 431 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 TNFSF10P50591 281 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 RAB28P51157 221 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ARSFP54793 590 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 KCNK10P57789 538 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 CACNG1Q06432 222 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 ITIH4Q14624 930 aa6.99□□□□□ -1.29
YBX3-209ENST00000540747 NAA30Q147X3 362 aaPredicted RBP6.99□□□□□ -1.29
YBX3-209ENST00000540747 ZXDCQ2QGD7 858 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms