RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 KIR2DS3Q14952 304 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 SUZ12Q15022 739 aaKnown RBP11.46□□□□□ -0.57
VTN-202ENST00000539746 PLCL1Q15111 1095 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 ZNF648Q5T619 568 aaPredicted RBP11.46□□□□□ -0.57
VTN-202ENST00000539746 LCTLQ6UWM7 567 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 C17orf64Q86WR6 236 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 CARFQ8N187 725 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 OR2L8Q8NGY9 312 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 OR56A3Q8NH54 315 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 METTL6Q8TCB7 284 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 LCN9Q8WX39 176 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 STARD8Q92502 1023 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 MED8Q96G25 268 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 PPP3R2Q96LZ3 170 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 SLC6A18Q96N87 628 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 PELI2Q9HAT8 420 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 STOX2Q9P2F5 926 aaPredicted RBP11.46□□□□□ -0.57
VTN-202ENST00000539746 GALPQ9UBC7 116 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 KCNK6Q9Y257 313 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 TMED5Q9Y3A6 229 aa11.46□□□□□ -0.57
VTN-202ENST00000539746 SZT2Q5T011 3432 aa11.46□□□□□ -0.58
VTN-202ENST00000539746 ATXN2Q99700 1313 aaKnown RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 A0A1W2PR77 199 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 ANTXRLA6NF34 631 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 LMO7DNF2Z398 122 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 AQP9O43315 295 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 MYO1DO94832 1006 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 SLC16A8O95907 504 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 TOP3BO95985 862 aaKnown RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 F7P08709 466 aaPredicted RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 SBK3P0C264 359 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 CMPK1P30085 196 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 CASP2P42575 452 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 HSPA7P48741 367 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 AQP5P55064 265 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 SKP1P63208 163 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 TGM3Q08188 693 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 FZD2Q14332 565 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 RPE65Q16518 533 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 PHKG1Q16816 387 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 IMPG1Q17R60 797 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 PTCHD3Q3KNS1 767 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 UNC50Q53HI1 259 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 PRRT3Q5FWE3 981 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 PRAMEF14Q5SWL7 426 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 PRAMEF13Q5VWM6 474 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 CYB5D1Q6P9G0 228 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 ZCCHC23Q6ZST2 131 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 CCDC121Q6ZUS5 278 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 GOLGA7Q7Z5G4 137 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 SPATA19Q7Z5L4 167 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 YTHDF3Q7Z739 585 aaKnown RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 THOC6Q86W42 341 aaKnown RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 TMEFF1Q8IYR6 380 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 PELI3Q8N2H9 469 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 ZNF655Q8N720 491 aaPredicted RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 ACTRT2Q8TDY3 377 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 TRPC4APQ8TEL6 797 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 AGAP11Q8TF27 550 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 PDXPQ96GD0 296 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 DPYSL5Q9BPU6 564 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 AIF1LQ9BQI0 150 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 SRMSQ9H3Y6 488 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 GSTO2Q9H4Y5 243 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 NOL11Q9H8H0 719 aaKnown RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 SEMA4BQ9NPR2 832 aaPredicted RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 TCF7L2Q9NQB0 619 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 NDE1Q9NXR1 346 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 AHSPQ9NZD4 102 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 MBD1Q9UIS9 605 aaPredicted RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 ADAMTS6Q9UKP5 1117 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 SNX7Q9UNH6 387 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 TDRKHQ9Y2W6 561 aaKnown RBP11.45□□□□□ -0.58
VTN-202ENST00000539746 PLXND1Q9Y4D7 1925 aa11.45□□□□□ -0.58
VTN-202ENST00000539746 REV3LO60673 3130 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 DYTNA2CJ06 578 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 PRR19A6NJB7 356 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 DIAPH2O60879 1101 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 ERGP11308 486 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 ACPPP15309 386 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 PDHA2P29803 388 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 CA5AP35218 305 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 GSTM5P46439 218 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 RXRGP48443 463 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 PXNP49023 591 aaPredicted RBP11.44□□□□□ -0.58
VTN-202ENST00000539746 DUSP3P51452 185 aaPredicted RBP11.44□□□□□ -0.58
VTN-202ENST00000539746 CCR8P51685 355 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 ATXN3P54252 364 aaPredicted RBP11.44□□□□□ -0.58
VTN-202ENST00000539746 EPHA4P54764 986 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 INHBCP55103 352 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 CSTF3Q12996 717 aaKnown RBP11.44□□□□□ -0.58
VTN-202ENST00000539746 GRIK2Q13002 908 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 NAE1Q13564 534 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 CLPPQ16740 277 aaPredicted RBP11.44□□□□□ -0.58
VTN-202ENST00000539746 ATP6AP1LQ52LC2 224 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 PEAR1Q5VY43 1037 aaPredicted RBP11.44□□□□□ -0.58
VTN-202ENST00000539746 KANK2Q63ZY3 851 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 ATG9BQ674R7 924 aa11.44□□□□□ -0.58
VTN-202ENST00000539746 NIPAL1Q6NVV3 410 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms