RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 STK38LQ9Y2H1 464 aa15.69■□□□□ 0.1
TRAF3-204ENST00000539721 FIS1Q9Y3D6 152 aa15.69■□□□□ 0.1
TRAF3-204ENST00000539721 COLEC10Q9Y6Z7 277 aa15.69■□□□□ 0.1
TRAF3-204ENST00000539721 TRBV23OR9-2A0A075B6M9 112 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 OR7A17O14581 309 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 KATNA1O75449 491 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 CCNG1P51959 295 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 HK2P52789 917 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 HNRNPKP61978 463 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRAF3-204ENST00000539721 TSTA3Q13630 321 aaPredicted RBP15.68■□□□□ 0.1
TRAF3-204ENST00000539721 SIM2Q14190 667 aaPredicted RBP15.68■□□□□ 0.1
TRAF3-204ENST00000539721 PRAMEF14Q5SWL7 426 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 GPRIN3Q6ZVF9 776 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 SYVN1Q86TM6 617 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 THOC6Q86W42 341 aaKnown RBP15.68■□□□□ 0.1
TRAF3-204ENST00000539721 KLHDC8AQ8IYD2 350 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 KIRREL3Q8IZU9 778 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 ZBTB44Q8NCP5 570 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 OR52B6Q8NGF0 335 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 OR56A3Q8NH54 315 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 SEC16BQ96JE7 1060 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 ZNF382Q96SR6 550 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 TNFRSF12AQ9NP84 129 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 ABCF3Q9NUQ8 709 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 USH1CQ9Y6N9 552 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 TMEM131Q92545 1883 aa15.68■□□□□ 0.1
TRAF3-204ENST00000539721 A0A0G2JND7 137 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 ZNF839A8K0R7 811 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 TMEM233B4DJY2 109 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 TNFRSF10AO00220 468 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 KDM1AO60341 852 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CRCPO75575 148 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 OTCP00480 354 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 SLC2A4P14672 509 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 NDUFS1P28331 727 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 HSD17B2P37059 387 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 AQP5P55064 265 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 PKNOX1P55347 436 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 TBPL1P62380 186 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 ARHGAP19Q14CB8 494 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CAPN13Q6MZZ7 669 aaPredicted RBP15.67■□□□□ 0.1
TRAF3-204ENST00000539721 IYDQ6PHW0 289 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 PRR23BQ6ZRT6 265 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 GKN2Q86XP6 184 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 SYT12Q8IV01 421 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 TRIM48Q8IWZ4 208 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 LMNTD1Q8N9Z9 388 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CCDC197Q8NCU1 140 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 FAM46DQ8NEK8 389 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 SIKE1Q9BRV8 207 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 INTS7Q9NVH2 962 aaKnown RBP15.67■□□□□ 0.1
TRAF3-204ENST00000539721 ZNF624Q9P2J8 865 aaPredicted RBP15.67■□□□□ 0.1
TRAF3-204ENST00000539721 DOLKQ9UPQ8 538 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 TRAF6Q9Y4K3 522 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 ARHGEF17Q96PE2 2063 aaPredicted RBP15.67■□□□□ 0.1
TRAF3-204ENST00000539721 PRAMEF33A0A0G2JMD5 474 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 A0A1B0GTL3 188 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 E7ENX8 843 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 SLCO1B7G3V0H7 640 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 OR4F21O95013 312 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 ESRRBO95718 433 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 PRDX3P30048 256 aaKnown RBP15.67■□□□□ 0.1
TRAF3-204ENST00000539721 SLC19A1P41440 591 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CTSKP43235 329 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 ARFIP2P53365 341 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 TAP2Q03519 686 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CDC16Q13042 620 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 FASTKQ14296 549 aaKnown RBP15.67■□□□□ 0.1
TRAF3-204ENST00000539721 KIF19Q2TAC6 998 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CLEC6AQ6EIG7 209 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CACNA2D3Q8IZS8 1091 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CLYBLQ8N0X4 340 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 OR52E1Q8NGJ3 308 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 C10orf82Q8WW14 230 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 FAR2Q96K12 515 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CDK15Q96Q40 435 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 RAB11FIP5Q9BXF6 653 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 TMEM120AQ9BXJ8 343 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 KIR3DX1Q9H7L2 352 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 ERVMER34-1Q9H9K5 563 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 CCDC177Q9NQR7 707 aaPredicted RBP15.67■□□□□ 0.1
TRAF3-204ENST00000539721 VTI1BQ9UEU0 232 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 PCDHGA2Q9Y5H1 932 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 SNX11Q9Y5W9 270 aa15.67■□□□□ 0.1
TRAF3-204ENST00000539721 SDK1Q7Z5N4 2213 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 OR5K4A6NMS3 321 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 B4DGG1 531 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 MATN2O00339 956 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 AZIN1O14977 448 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 AQP9O43315 295 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 ERGP11308 486 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 TRAF3Q13114 568 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 CYP2A13Q16696 494 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 SUSD1Q6UWL2 747 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 MILR1Q7Z6M3 343 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 LRRC56Q8IYG6 542 aaPredicted RBP15.66■□□□□ 0.1
TRAF3-204ENST00000539721 C2orf73Q8N5S3 287 aaPredicted RBP15.66■□□□□ 0.1
TRAF3-204ENST00000539721 DCBLD1Q8N8Z6 715 aa15.66■□□□□ 0.1
TRAF3-204ENST00000539721 ZNF548Q8NEK5 533 aaPredicted RBP15.66■□□□□ 0.1
TRAF3-204ENST00000539721 OR4F6Q8NGB9 312 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms