RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 CAPNS1P04632 268 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 TAS2R38P59533 333 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 SKIV2LQ15477 1246 aaKnown RBP19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 AGBL4Q5VU57 503 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 FAM46CQ5VWP2 391 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 VRK3Q8IV63 474 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 DNAJB14Q8TBM8 379 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 MCOLN3Q8TDD5 553 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 ASZ1Q8WWH4 475 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 GABRG3Q99928 467 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 YY1AP1Q9H869 796 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 ACTR8Q9H981 624 aa19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 ZNF490Q9ULM2 529 aaPredicted RBP19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 POLR3HQ9Y535 204 aaPredicted RBP19.75■□□□□ 0.75
PACSIN3-211ENST00000539589 K7ESM1 405 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 KRT6AP02538 564 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 KRT6BP04259 564 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 COL9A1P20849 921 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 JAK1P23458 1154 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 NTSR1P30989 418 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 CASP2P42575 452 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 KRT6CP48668 564 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 IMPG1Q17R60 797 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 LDLRAP1Q5SW96 308 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 IRAK1BP1Q5VVH5 260 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 CYP2U1Q7Z449 544 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 TMEM102Q8N9M5 508 aaPredicted RBP19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 BTN2A2Q8WVV5 523 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 TMEM125Q96AQ2 219 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 CDX2Q99626 313 aaPredicted RBP19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 MKRN2Q9H000 416 aaKnown RBP19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 CXorf56Q9H5V9 222 aa19.74■□□□□ 0.75
PACSIN3-211ENST00000539589 C15orf38-AP3S2A0A0A6YYH1 394 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 GRIA3P42263 894 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 GNPDA1P46926 289 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 AP1S2P56377 157 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 RPS14P62263 151 aaKnown RBP19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 RPL38P63173 70 aaKnown RBP19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 ARPINQ7Z6K5 226 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 TICAM1Q8IUC6 712 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 DPP10Q8N608 796 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 DNASE1L2Q92874 299 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 USP7Q93009 1102 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 VPS35Q96QK1 796 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 SLC6A17Q9H1V8 727 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 MUC13Q9H3R2 512 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 C8orf33Q9H7E9 229 aaPredicted RBP19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 FARSBQ9NSD9 589 aaKnown RBP19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 GMPR2Q9P2T1 348 aaKnown RBP19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 CNOT6Q9ULM6 557 aaKnown RBP19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 A0A1W2PQF6 199 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 AQP12BA6NM10 295 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 ANKRD28O15084 1053 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 SGO1Q5FBB7 561 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 PRR23BQ6ZRT6 265 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 AQP12AQ8IXF9 295 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 GLYATL1Q969I3 302 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 SLCO4A1Q96BD0 722 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 MYCBPQ99417 103 aaPredicted RBP19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 ACTL8Q9H568 366 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 DLGAP2Q9P1A6 1054 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 ACTR3BQ9P1U1 418 aa19.73■□□□□ 0.75
PACSIN3-211ENST00000539589 SLCO2B1O94956 709 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 KLF8O95600 359 aaPredicted RBP19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 LYNP07948 512 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 UBTFL6P0CB48 400 aaPredicted RBP19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 MLLT1Q03111 559 aaPredicted RBP19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 FOLH1Q04609 750 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 CACHD1Q5VU97 1274 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 LCN8Q6JVE9 175 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 RAVER1Q8IY67 606 aaKnown RBP19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 GOLM1Q8NBJ4 401 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 RAB7BQ96AH8 199 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 NUS1Q96E22 293 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 ZBTB18Q99592 522 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 Q9H521 79 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 LRTM1Q9HBL6 345 aa19.72■□□□□ 0.75
PACSIN3-211ENST00000539589 A0A1W2PP55 124 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 OR2AG2A6NM03 316 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 EPORP19235 508 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 ATP6V1B2P21281 511 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 SLC6A12P48065 614 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 EEFSECP57772 596 aaKnown RBP19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 SMAD2Q15796 467 aaKnown RBP19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 CPSF6Q16630 551 aaKnown RBP eCLIP19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 PTCHD3Q3KNS1 767 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 GGTA1PQ4G0N0 100 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 RABL3Q5HYI8 236 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 GALNT13Q8IUC8 556 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 RGL4Q8IZJ4 473 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 HDDC3Q8N4P3 179 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 BEND7Q8N7W2 519 aaPredicted RBP19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 ALG2Q9H553 416 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 ZNHIT2Q9UHR6 403 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 TXNDC9O14530 226 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 INPP4BO15327 924 aa19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 LZTS3O60299 673 aaPredicted RBP19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 RNASEH1O60930 286 aaKnown RBP19.71■□□□□ 0.75
PACSIN3-211ENST00000539589 SEC22BO75396 215 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms