RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SDE2Q6IQ49 451 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 KLHL35Q6PF15 583 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 RALGPS2Q86X27 583 aaPredicted RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 OR52B6Q8NGF0 335 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 OR2T3Q8NH03 318 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 ASZ1Q8WWH4 475 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 TMIGD2Q96BF3 282 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 GAS2L1Q99501 681 aaPredicted RBP16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 SLC29A1Q99808 456 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 SPAG4Q9NPE6 437 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 MRGBPQ9NV56 204 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 MYRFQ9Y2G1 1151 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 PTGDR2Q9Y5Y4 395 aa16.66■□□□□ 0.26
PCDHB17P-201ENST00000539533 ATP6AP2A0A1C7CYW4 349 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 A0A1W2PQF6 199 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 H3BNH8 94 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 ATP6AP2O75787 350 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 PRLHRP49683 370 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 CDK9P50750 372 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 PCBP2Q15366 365 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 RBBP7Q16576 425 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 C1QTNF12Q5T7M4 302 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 ZNF776Q68DI1 518 aaPredicted RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 KRT80Q6KB66 452 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 SYVN1Q86TM6 617 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 NLRP8Q86W28 1048 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 ERI1Q8IV48 349 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 ZBTB8BQ8NAP8 495 aaPredicted RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 RHBDF1Q96CC6 855 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 DUS3LQ96G46 650 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 LRCH3Q96II8 777 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 C3orf30Q96M34 536 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 CDK15Q96Q40 435 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 UHRF1Q96T88 793 aaPredicted RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 CIB1Q99828 191 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 CAAP1Q9H8G2 361 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 TRPV5Q9NQA5 729 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 PNPLA3Q9NST1 481 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 PDE10AQ9Y233 779 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 SH3GLB1Q9Y371 365 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 TIMM22Q9Y584 194 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 COL4A2P08572 1712 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 DOCK9Q9BZ29 2069 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 KRT87PA6NCN2 255 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 EIF3FO00303 357 aaPredicted RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 KPNA5O15131 536 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 UBDO15205 165 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 NARSO43776 548 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 ATG13O75143 517 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 RPIAP49247 311 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 PLOD1Q02809 727 aaPredicted RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 SKIV2LQ15477 1246 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 KANK2Q63ZY3 851 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 CYP2R1Q6VVX0 501 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 UBE2R2Q712K3 238 aaPredicted RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 GANCQ8TET4 914 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 ASB11Q8WXH4 323 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 UBE2ZQ9H832 354 aaPredicted RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 NOL11Q9H8H0 719 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 RDH14Q9HBH5 336 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 OLAHQ9NV23 265 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 FBXL12Q9NXK8 326 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 CCDC167Q9P0B6 97 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 CD300AQ9UGN4 299 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 TDRKHQ9Y2W6 561 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 TNPO3Q9Y5L0 923 aaKnown RBP16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 TRPM6Q9BX84 2022 aa16.65■□□□□ 0.26
PCDHB17P-201ENST00000539533 QSOX1O00391 747 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLCO2B1O94956 709 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 MLYCDO95822 493 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 HOXB2P14652 356 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 PBLDP30039 288 aaPredicted RBP16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 PREPP48147 710 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 STARD3Q14849 445 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 HMBOX1Q6NT76 420 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 LPCAT2Q7L5N7 544 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 OR56A4Q8NGH8 313 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 TWIST2Q8WVJ9 160 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 GFM2Q969S9 779 aaKnown RBP16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 RMND5BQ96G75 393 aaPredicted RBP16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 CCM2Q9BSQ5 444 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 TUBB1Q9H4B7 451 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 GULP1Q9UBP9 304 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 ESRRBO95718 433 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 SNRPB2P08579 225 aaKnown RBP16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 GRSF1Q12849 480 aaKnown RBP eCLIP16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 SMAD4Q13485 552 aaKnown RBP16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 GTF2H2Q13888 395 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 C6orf10Q5SRN2 563 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 GTF2H2CQ6P1K8 395 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 GOLGA7Q7Z5G4 137 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 FNDC8Q8TC99 324 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 KLK6Q92876 244 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 FOXJ1Q92949 421 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 C19orf60Q96EN9 201 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 SLC12A9Q9BXP2 914 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 TRIM39Q9HCM9 518 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 ARL15Q9NXU5 204 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 WWOXQ9NZC7 414 aa16.64■□□□□ 0.25
PCDHB17P-201ENST00000539533 PRR23AA6NEV1 266 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms