RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 PHOX2BQ99453 314 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 SERPINI1Q99574 410 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 ZBTB26Q9HCK0 441 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TCF7L2Q9NQB0 619 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ADAMTS6Q9UKP5 1117 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 BLOC1S6Q9UL45 172 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 PAIP2BQ9ULR5 123 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 PRPF19Q9UMS4 504 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 PSMD13Q9UNM6 376 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 WDR37Q9Y2I8 494 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TNPO3Q9Y5L0 923 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 VPS13AQ96RL7 3174 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 CUL9Q8IWT3 2517 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 WDFY4Q6ZS81 3184 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3DA0A087WVF3 549 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3IA0A087WXS9 549 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3EA0A087X179 549 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3KA0A087X1G2 549 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 A0A1W2PQU0 124 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3FA6NER0 549 aaPredicted RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3LB9A6J9 549 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 H0YJX3 145 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TXNDC9O14530 226 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 SLC22A2O15244 555 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 DCXO43602 365 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 MTX2O75431 263 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 MLYCDO95822 493 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 C8GP07360 202 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 GSTM1P09488 218 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3HP0C7X1 549 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ADSLP30566 484 aaPredicted RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 PSMD7P51665 324 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 CTSCP53634 463 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 GSTM4Q03013 218 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBL3Q12788 808 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 TMEM115Q12893 351 aaPredicted RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 CCNIQ14094 377 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 PHKG1Q16816 387 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 LSM12Q3MHD2 195 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 TMEM31Q5JXX7 168 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3GQ6DHY5 549 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3CQ6IPX1 549 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 NEK5Q6P3R8 708 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 XKR5Q6UX68 686 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 CHSY3Q70JA7 882 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TBC1D3Q8IZP1 549 aaPredicted RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 PQLC1Q8N2U9 271 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 FBXW8Q8N3Y1 598 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 AGR3Q8TD06 166 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ASB11Q8WXH4 323 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 LINC00615Q96LM1 132 aaPredicted RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 C1QTNF2Q9BXJ5 285 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 SLC12A9Q9BXP2 914 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 NUSAP1Q9BXS6 441 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 NUF2Q9BZD4 464 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 SHCBP1LQ9BZQ2 653 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ZCCHC2Q9C0B9 1178 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 BTBD1Q9H0C5 482 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 RBM38Q9H0Z9 239 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 CD274Q9NZQ7 290 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ZNF225Q9UK10 706 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 CNOT11Q9UKZ1 510 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 ZFR2Q9UPR6 939 aaKnown RBP8.63□□□□□ -1.03
DDB1-213ENST00000539332 SH3GLB1Q9Y371 365 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 TRAF6Q9Y4K3 522 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 ASB1Q9Y576 335 aa8.63□□□□□ -1.03
DDB1-213ENST00000539332 SLC5A10A0PJK1 596 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 PPP6CO00743 305 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 AZIN1O14977 448 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 TAPBPO15533 448 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 PI15O43692 258 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 SNX2O60749 519 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 RNGTTO60942 597 aaKnown RBP8.62□□□□□ -1.03
DDB1-213ENST00000539332 CBFA2T3O75081 653 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 MATN4O95460 622 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 APBB3O95704 486 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 ESRRBO95718 433 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 TFAP2AP05549 437 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 FAM58BPP0C7Q3 252 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 PEX2P28328 305 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 GGT5P36269 586 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 CDH13P55290 713 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 PKNOX1P55347 436 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 PPP2CBP62714 309 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 PPP2CAP67775 309 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 SGCGQ13326 291 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 FGL2Q14314 439 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 WSCD2Q2TBF2 565 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 MAP7D1Q3KQU3 841 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 GRAMD1BQ3KR37 738 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 C1QTNF12Q5T7M4 302 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 SULT1C3Q6IMI6 304 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 RNF165Q6ZSG1 346 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 FRA10AC1Q70Z53 315 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 DET1Q7L5Y6 550 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 HORMAD1Q86X24 394 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 ERI1Q8IV48 349 aaKnown RBP8.62□□□□□ -1.03
DDB1-213ENST00000539332 VRK3Q8IV63 474 aa8.62□□□□□ -1.03
DDB1-213ENST00000539332 CLYBLQ8N0X4 340 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms