RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ARL14Q8N4G2 192 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 PHC3Q8NDX5 983 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 OR5AR1Q8NGP9 310 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 C10orf82Q8WW14 230 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 CXorf40BQ96DE9 158 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 APOLD1Q96LR9 279 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 TRIM55Q9BYV6 548 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 DRC3Q9H069 523 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 POT1Q9NUX5 634 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 PNPOQ9NVS9 261 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 CPNE7Q9UBL6 633 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 MARCOQ9UEW3 520 aaPredicted RBP16.74■□□□□ 0.27
CLN6-202ENST00000538696 ADAMTS6Q9UKP5 1117 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 ASF1AQ9Y294 204 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 FRYLO94915 3013 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 GVINP1Q7Z2Y8 2422 aa16.74■□□□□ 0.27
CLN6-202ENST00000538696 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.73■□□□□ 0.27
CLN6-202ENST00000538696 CCDC189A1A4V9 331 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 LRRC14BA6NHZ5 514 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 SH3BP5O60239 455 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 NPHS1O60500 1241 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 PSIP1O75475 530 aaKnown RBP16.73■□□□□ 0.27
CLN6-202ENST00000538696 TGDSO95455 350 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 GFAPP14136 432 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 MPSTP25325 297 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 LIMK1P53667 647 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 ZSCAN26Q16670 478 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 UNC50Q53HI1 259 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.73■□□□□ 0.27
CLN6-202ENST00000538696 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.73■□□□□ 0.27
CLN6-202ENST00000538696 ADAMTSL2Q86TH1 951 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 SLC9B2Q86UD5 537 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 TRIM48Q8IWZ4 208 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 KIAA2013Q8IYS2 634 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 FBXO39Q8N4B4 442 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 BAHD1Q8TBE0 780 aaPredicted RBP16.73■□□□□ 0.27
CLN6-202ENST00000538696 PPP4R1Q8TF05 950 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 SETD7Q8WTS6 366 aaKnown RBP16.73■□□□□ 0.27
CLN6-202ENST00000538696 ASB11Q8WXH4 323 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 L3HYPDHQ96EM0 354 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 FOPNLQ96NB1 174 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 FERD3LQ96RJ6 166 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 HGH1Q9BTY7 390 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 NUDT4Q9NZJ9 180 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 DCTN4Q9UJW0 460 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 HEBP2Q9Y5Z4 205 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 RP1P56715 2156 aa16.73■□□□□ 0.27
CLN6-202ENST00000538696 NCF1BA6NI72 391 aaPredicted RBP16.72■□□□□ 0.27
CLN6-202ENST00000538696 SYCE1LA8MT33 242 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 NCF1CA8MVU1 366 aaPredicted RBP16.72■□□□□ 0.27
CLN6-202ENST00000538696 ARHGEF33A8MVX0 844 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 KLK8O60259 260 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 VIPP01282 170 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 KITP10721 976 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 NCF1P14598 390 aaPredicted RBP16.72■□□□□ 0.27
CLN6-202ENST00000538696 IMPDH1P20839 514 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 FASLGP48023 281 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 HHEXQ03014 270 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 SP140Q13342 867 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 NR0B2Q15466 257 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 PPP1R3AQ16821 1122 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 PFKFB4Q16877 469 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 ARL13AQ5H913 290 aaPredicted RBP16.72■□□□□ 0.27
CLN6-202ENST00000538696 ZNF678Q5SXM1 525 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 RPS27LQ71UM5 84 aaKnown RBP16.72■□□□□ 0.27
CLN6-202ENST00000538696 RAB44Q7Z6P3 723 aaPredicted RBP16.72■□□□□ 0.27
CLN6-202ENST00000538696 ZNF781Q8N8C0 355 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 OR5K2Q8NHB8 316 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 RHBDD1Q8TEB9 315 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 DLG3Q92796 817 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 CAMK1GQ96NX5 476 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 TRIT1Q9H3H1 467 aaKnown RBP16.72■□□□□ 0.27
CLN6-202ENST00000538696 GSTO2Q9H4Y5 243 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 MVB12BQ9H7P6 319 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 UTP6Q9NYH9 597 aaKnown RBP16.72■□□□□ 0.27
CLN6-202ENST00000538696 ARL2BPQ9Y2Y0 163 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 RNF215Q9Y6U7 377 aa16.72■□□□□ 0.27
CLN6-202ENST00000538696 KRT87PA6NCN2 255 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 GFYI3L273 518 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 PPM1DO15297 605 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 CBFA2T3O75081 653 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 SIX3O95343 332 aaPredicted RBP16.71■□□□□ 0.27
CLN6-202ENST00000538696 C1orf105O95561 183 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 C8GP07360 202 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 HERVK_113P63132 956 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 GRB7Q14451 532 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 PHKG1Q16816 387 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 CCSMST1Q4G0I0 132 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 CFAP157Q5JU67 520 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 FRA10AC1Q70Z53 315 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 UBE2R2Q712K3 238 aaPredicted RBP16.71■□□□□ 0.27
CLN6-202ENST00000538696 ZNF761Q86XN6 746 aaPredicted RBP16.71■□□□□ 0.27
CLN6-202ENST00000538696 DCUN1D3Q8IWE4 304 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 TBC1D21Q8IYX1 336 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 AVL9Q8NBF6 648 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 CNDP2Q96KP4 475 aaKnown RBP16.71■□□□□ 0.27
CLN6-202ENST00000538696 TMEM120AQ9BXJ8 343 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 ERVK-6Q9BXR3 956 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 SHCBP1LQ9BZQ2 653 aa16.71■□□□□ 0.27
CLN6-202ENST00000538696 KCNK13Q9HB14 408 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms