RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TBC1D3EA0A087X179 549 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TBC1D3KA0A087X1G2 549 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TBC1D3FA6NER0 549 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 OR2AG2A6NM03 316 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CHURC1-FNTBB4DL54 471 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TBC1D3LB9A6J9 549 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RNGTTO60942 597 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 FAM58BPP0C7Q3 252 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TBC1D3HP0C7X1 549 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BMP2P12643 396 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GFAPP14136 432 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 IDO1P14902 403 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DGKEP52429 567 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC7A2P52569 658 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ATXN3P54252 364 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PTPN5P54829 565 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 FOXA1P55317 472 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 APOFQ13790 326 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GRB7Q14451 532 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 IRF4Q15306 451 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 WSCD2Q2TBF2 565 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TBC1D3GQ6DHY5 549 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TBC1D3CQ6IPX1 549 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CHERPQ8IWX8 916 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TBC1D3Q8IZP1 549 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BEND7Q8N7W2 519 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TSTD1Q8NFU3 115 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 OR2T34Q8NGX1 318 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CD200R1Q8TD46 325 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RLN3Q8WXF3 142 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LRTOMTQ8WZ04 291 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GLYATL1Q969I3 302 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 EME1Q96AY2 570 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 OSBPL11Q9BXB4 747 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RBM38Q9H0Z9 239 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 COQ10BQ9H8M1 238 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GID8Q9NWU2 228 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 POLG2Q9UHN1 485 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CNOT6Q9ULM6 557 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 FZD4Q9ULV1 537 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZFC3H1O60293 1989 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PLXND1Q9Y4D7 1925 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 C7orf72A4D263 438 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LRRC14BA6NHZ5 514 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SLC25A14O95258 325 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 STAMBPO95630 424 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CLPTM1O96005 669 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PAK4O96013 591 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ESR1P03372 595 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ZNF7P17097 686 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 EEF1DP29692 281 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GPR1P46091 355 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ADARP55265 1226 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BNIP2Q12982 314 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MTAPQ13126 283 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MYBPC3Q14896 1274 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ADRM1Q16186 407 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 KIF19Q2TAC6 998 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BLOC1S3Q6QNY0 202 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 USP30Q70CQ3 517 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NRSN1Q8IZ57 195 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 ABCA7Q8IZY2 2146 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SYNPOQ8N3V7 929 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 METTL25Q8N6Q8 603 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DDHD1Q8NEL9 900 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 TRPC4APQ8TEL6 797 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 BTN2A2Q8WVV5 523 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 EXT2Q93063 718 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NSUN5Q96P11 429 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CCT7Q99832 543 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 POLMQ9NP87 494 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CCM2LQ9NUG4 571 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 FAM8A1Q9UBU6 413 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 IKZF3Q9UKT9 509 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 RNF112Q9ULX5 631 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CA5BQ9Y2D0 317 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 GPR45Q9Y5Y3 372 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 COMMD10Q9Y6G5 202 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LRP4O75096 1905 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 WDR87Q6ZQQ6 2873 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 DMDP11532 3685 aa12.63□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SDK1Q7Z5N4 2213 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 E5RI56 91 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 FXYD1O00168 92 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NME4O00746 187 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PFDN6O15212 129 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SGTAO43765 313 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 SUPT3HO75486 399 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 MLYCDO95822 493 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 C7P10643 843 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CAPN3P20807 821 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 CTSCP53634 463 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 HPCAP84074 193 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 NADK2Q4G0N4 442 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 XKR7Q5GH72 579 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 C6orf52Q5T4I8 152 aa12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 PTRHD1Q6GMV3 140 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-202ENST00000536708 LCN8Q6JVE9 175 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms