RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ANAPC2Q9UJX6 822 aa13.04□□□□□ -0.32
VPS33B-202ENST00000535906 SLC22A14Q9Y267 594 aa13.04□□□□□ -0.32
VPS33B-202ENST00000535906 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 C16orf96A6NNT2 1141 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 PRAMEF4O60810 478 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 BMP10O95393 424 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 KRT6AP02538 564 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 KRT6BP04259 564 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 MYOGP15173 224 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 TCF3P15923 654 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 KRT6CP48668 564 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 HNMTP50135 292 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 SLC36A3Q495N2 470 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 USP39Q53GS9 565 aaKnown RBP13.03□□□□□ -0.32
VPS33B-202ENST00000535906 SPANXN4Q5MJ08 99 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 PRAMEF9Q5VWM5 478 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 PRR23BQ6ZRT6 265 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 RBM23Q86U06 439 aaKnown RBP13.03□□□□□ -0.32
VPS33B-202ENST00000535906 PROSER1Q86XN7 944 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 TRAM1L1Q8N609 369 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 DDHD1Q8NEL9 900 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 CLHC1Q8NHS4 586 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 SLC13A3Q8WWT9 602 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 GTF2H4Q92759 462 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 RSPRY1Q96DX4 576 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 DPY30Q9C005 99 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 ATG10Q9H0Y0 220 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 TUBA8Q9NY65 449 aaPredicted RBP13.03□□□□□ -0.32
VPS33B-202ENST00000535906 PRKAG2Q9UGJ0 569 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 RSL24D1Q9UHA3 163 aaKnown RBP13.03□□□□□ -0.32
VPS33B-202ENST00000535906 ITM2BQ9Y287 266 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 MRPS23Q9Y3D9 190 aaKnown RBP13.03□□□□□ -0.32
VPS33B-202ENST00000535906 KCNE1BA0A087WTH5 132 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 DFNA5O60443 496 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 GNAO1P09471 354 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 BCKDHAP12694 445 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 SLC5A2P31639 672 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 CACHD1Q5VU97 1274 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 TTC23LQ6PF05 361 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 TECPR1Q7Z6L1 1165 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 TCAIMQ8N3R3 496 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 TNIP2Q8NFZ5 429 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 MCOLN3Q8TDD5 553 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 ASZ1Q8WWH4 475 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 SELENOMQ8WWX9 145 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 ZBTB18Q99592 522 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 ZSCAN5AQ9BUG6 496 aa13.03□□□□□ -0.32
VPS33B-202ENST00000535906 TRIM64CA6NLI5 447 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 SLC9A3R1O14745 358 aaPredicted RBP13.02□□□□□ -0.32
VPS33B-202ENST00000535906 KPNA5O15131 536 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 SLCO2B1O94956 709 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 KCNH1O95259 989 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 PGRP06401 933 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 ADH5P11766 374 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 CYP2A7P20853 494 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 XPAP23025 273 aaPredicted RBP13.02□□□□□ -0.32
VPS33B-202ENST00000535906 ITPKAP23677 461 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 VIPR2P41587 438 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 METAP1P53582 386 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 CTSCP53634 463 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 UBE3AQ05086 875 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 SP140Q13342 867 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 GLYATQ6IB77 296 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 LIPIQ6XZB0 460 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 DPPA4Q7L190 304 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 LILRA3Q8N6C8 439 aaPredicted RBP13.02□□□□□ -0.32
VPS33B-202ENST00000535906 BTN2A2Q8WVV5 523 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 TMIGD2Q96BF3 282 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 BIRC7Q96CA5 298 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 CLMPQ9H6B4 373 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 CD320Q9NPF0 282 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 ASIC5Q9NY37 505 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 DLGAP4Q9Y2H0 992 aa13.02□□□□□ -0.32
VPS33B-202ENST00000535906 ZNF197O14709 1029 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 AREL1O15033 823 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 SLC16A5O15375 505 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 AP2A2O94973 939 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 PCSK6P29122 969 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 MMP12P39900 470 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 CDK9P50750 372 aaKnown RBP13.02□□□□□ -0.33
VPS33B-202ENST00000535906 PFN3P60673 137 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 MAPKAPK3Q16644 382 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 GGTA1PQ4G0N0 100 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 PARS2Q7L3T8 475 aaKnown RBP13.02□□□□□ -0.33
VPS33B-202ENST00000535906 DTWD1Q8N5C7 304 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
VPS33B-202ENST00000535906 RASGEF1AQ8N9B8 481 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 L3MBTL4Q8NA19 623 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 FOXJ1Q92949 421 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 ELOVL6Q9H5J4 265 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 DDX18Q9NVP1 670 aaKnown RBP13.02□□□□□ -0.33
VPS33B-202ENST00000535906 DKK3Q9UBP4 350 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 PCDHB3Q9Y5E6 796 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 V9GYQ6 96 aa13.02□□□□□ -0.33
VPS33B-202ENST00000535906 A0A087WXM4 84 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
VPS33B-202ENST00000535906 TRIM64A6NGJ6 449 aa13.01□□□□□ -0.33
VPS33B-202ENST00000535906 EI24O14681 340 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms