RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 FOXJ2Q9P0K8 574 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 CHKBQ9Y259 395 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 LUC7L2Q9Y383 392 aaKnown RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 PCYT1BQ9Y5K3 369 aaPredicted RBP5.11□□□□□ -1.59
ATM-224ENST00000534625 COL12A1Q99715 3063 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 LRRK2Q5S007 2527 aa5.11□□□□□ -1.59
ATM-224ENST00000534625 IGHV1OR21-1A0A087WYE8 117 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 SYCE3A1L190 88 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 J3QKU1 62 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 INPP4BO15327 924 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 DNAJC6O75061 913 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 PROSCO94903 275 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 CLDN7O95471 211 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 EML2O95834 649 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 HLA-DQB2P05538 268 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 MMP2P08253 660 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 LIPCP11150 499 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 SPTBP11277 2137 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 FGF3P11487 239 aaPredicted RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 POU3F2P20265 443 aaPredicted RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 MAKP20794 623 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 CD82P27701 267 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 HNRNPH3P31942 346 aaKnown RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 CASP14P31944 242 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 GJC1P36383 396 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 ACTR1BP42025 376 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 SSR1P43307 286 aaKnown RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 SPINT3P49223 89 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 MAN2A2P49641 1150 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 EPHB1P54762 984 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 ACTR1AP61163 376 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 RPL26P61254 145 aaKnown RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 GBE1Q04446 702 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 TRA2AQ13595 282 aaKnown RBP eCLIP5.1□□□□□ -1.59
ATM-224ENST00000534625 PDK2Q15119 407 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 ASTE1Q2TB18 679 aaPredicted RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 MAP9Q49MG5 647 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 MANEAQ5SRI9 462 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 HENMT1Q5T8I9 393 aaKnown RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 TIGD7Q6NT04 549 aaPredicted RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 MARK2Q7KZI7 788 aaKnown RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 KIF18BQ86Y91 864 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 RAVER1Q8IY67 606 aaKnown RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 NDUFAF2Q8N183 169 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 SFRP1Q8N474 314 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 CNTD1Q8N815 330 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 OR4D9Q8NGE8 314 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 EXD1Q8NHP7 514 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 CHTF18Q8WVB6 975 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 EID2BQ96D98 161 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 IQCDQ96DY2 449 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 TAAR9Q96RI9 348 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 LYSMD1Q96S90 227 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 ZNF670Q9BS34 389 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 TDRD1Q9BXT4 1180 aaKnown RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 PACSIN1Q9BY11 444 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 ENKD1Q9H0I2 346 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 PCDH9Q9HC56 1237 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 TMEM9Q9P0T7 183 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 SEPT10Q9P0V9 454 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 IFNKQ9P0W0 207 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 CTTNBP2NLQ9P2B4 639 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 PDP2Q9P2J9 529 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 UVRAGQ9P2Y5 699 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 AMACRQ9UHK6 382 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 RPL26L1Q9UNX3 145 aaKnown RBP5.1□□□□□ -1.59
ATM-224ENST00000534625 PRKAB1Q9Y478 270 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 PCDHGA3Q9Y5H0 932 aa5.1□□□□□ -1.59
ATM-224ENST00000534625 C1orf232A0A0U1RR37 186 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 A6NCN8 305 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 C3orf70A6NLC5 250 aaPredicted RBP5.09□□□□□ -1.59
ATM-224ENST00000534625 ANKRD66B4E2M5 251 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 STMND1H3BQB6 276 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 PYCARD-AS1I3L0S3 204 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 KCNK1O00180 336 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 ZW10O43264 779 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 MTSS1O43312 755 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 APOL3O95236 402 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 JCHAINP01591 159 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 ATP1A1P05023 1023 aaKnown RBP5.09□□□□□ -1.59
ATM-224ENST00000534625 PYGLP06737 847 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 ADH4P08319 380 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 KRT7P08729 469 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 H2AFZP0C0S5 128 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 GAAP10253 952 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 THRAP10827 490 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 ITGB6P18564 788 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 KDELR1P24390 212 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 CSTF2P33240 577 aaKnown RBP eCLIP5.09□□□□□ -1.59
ATM-224ENST00000534625 MAN1A1P33908 653 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 CD86P42081 329 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 FASLGP48023 281 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 NANOS3P60323 173 aaKnown RBP5.09□□□□□ -1.59
ATM-224ENST00000534625 TPM4P67936 248 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 CYP4F2P78329 520 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 IFI35P80217 286 aaPredicted RBP5.09□□□□□ -1.59
ATM-224ENST00000534625 PPIDQ08752 370 aaKnown RBP5.09□□□□□ -1.59
ATM-224ENST00000534625 ZBTB17Q13105 803 aa5.09□□□□□ -1.59
ATM-224ENST00000534625 PEX6Q13608 980 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms